Gene detail

Detail information of GWHGAAEX016394/evm.TU.scaffold_75.99

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|643716917\|gb\|KDP28543.1\|	0	hypothetical protein JCGZ_14314 [Jatropha curcas]
Swissprot	tr\|Q9M146\|MGP4_ARATH	3.00E-165	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
trEMBL	tr\|A0A067K0E6\|A0A067K0E6_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP28543.1}
TAIR	AT4G01220	1.00E-164	Nucleotide-diphospho-sugar transferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000072	3432992	3454502	+

Transcript Sequence
>GWHTAAEX016394 AAAAATTCTACTCTCTTTTGATCGGACGCTTTTCTCCTTTCTGCCAGGCCCTCGAGCCTGTCCGTCTTGGTTTTAGGGCAAAAACTGCGGCTGCCTTCTGCGGCCGCCCGGTGCCTGCTGCGGCCGCCCTCAGCTTGCTGCGGCGCGGGTAGGAAGCGCACTGCCCCATCTCTGTCCTCCCCATCAATTTAACTCTTAATTCCTCACGGGCTTGCTGTTCGACCTCGCGGTATTATGTCTCACTGAACCGTCATTACCGGGCCATTAGATCTATTCTCCAGCTCTCTCCCAAAGCCATGACCACTTCTCTTCACCAAAGACAGCAACAAGCCCAAAAGGCTCTGATCGACGGGTACCCTTTGTCCCATCGCTCTTCCTCTTTCAGCTATGCGTTCCATCATCGCACTTCTTCCTTGTTCGGCCGCTCTGGCCTTCTCCTCTCTGTTGCCCTCATTATCCTCCTCATTCCCTTGATCTTCCGCGCTTTAACACCCTCCTTCTTCTTTTCCTCATCTTCCTCCCTTTCCCATTGGCGCCAATACACTCTATCTCAAGCCTTGGCCTTCGTCGCCGCAAAGAATAACACCGTCATTCTTTGCGCTGTGAGCCAGCCCTACCTCCCCTTCCTACAAAACTGGCTCATCACCATCTCCAGGCAGAGACGCCATGATCAAGTTCTCGTTATCGCGGAGGATTACGCCACTCTCGATCTGGTTAATCAGAGATGGCCCGGTCACGCCGTTCTTGTTCCTCCTGTTCCTGAATCCCAATCCGCGCACAAATTTGGATCGCAGGGCTTCTTCAATTTTACATCGCGGAGGCCGAGGCACCTGCTTGATGTATTGGAGTTGGGTTATAGTGTGATGTATAATGATGTGGATATGGTTTGGTTGGCTGATCCATTCTCTCATATGGAAGGGAATCATGATGTTTATTTCACCGATGATATGGCTCTTGTGAAACCCTTGAATCACCCTCACAGCTTGCCACAGCCTGGGAAGAAAGGAAGAACTTATATTTGTAGCTGCATGATCTTCCTTCGCCCAACTGATGCAGCAAAAACTGTGTTGATGAAATGGATTGAAGAACTTCAAATTCAGCCATGGTCTAAGAAGAGCAGGTCAAATGATCAGCCTGCCTTTAATTGGGCTTTGAACAAAACTGCTGGAGAGGTGGATATGTATTTGCTGCCCCAGTGTGCCTTTCCATCAGGAGGCCTTTACTTCAAAAATGCAACATGGGCTAAAGAAACTCAAGGGAAGCATGTGATTATTCACAATAACTACATCACTGGTTTCGAGAAGAAAATCCTACGGTTCCGCGAATTCGGGCTCTGGTTCGTGGACGACTACGCCTCTGAGTCGCCGCTTGGGAGATTATGAAGAACTCTGGCATTTTTATTTTGTTGTTGTTGTGAGATAAACCCCTAGATTACTTTTGGCAATTTGATGTCAAAATGTAATAGCCTCTTTTTTTTTTTATATAGTATGTAATTTCTTAGGATGTTTATATATAAGCACTTCAAACTTTTTTATATTACATAAATGATAGTGCTATATTTATAAATAATATTGCCTAAATGTTGGATATGTATTATTTAAATATTTTGGTACTATGAATGTAAATAACTATATTATGTTCATGGAAGTCCTATTTGTAAAT

Network for GWHGAAEX016394

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03407.15	Nucleotid_trans	124	341	2.40E-48

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT77
Carbohydrate-Active enzymes Family	GT77
Carbohydrate-Active enzymes Family	GT77
Carbohydrate-Active enzymes Family	GT77

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	33.650
SRP064423	SRR2545915	Juvenile tuber	38.440
SRP108465	SRR5643513	five period of Gastrodia elata	44.750
	SRR5643514	five period of Gastrodia elata	39.660
	SRR5643515	five period of Gastrodia elata	41.040
	SRR5643524	five period of Gastrodia elata	40.880
	SRR5643525	five period of Gastrodia elata	65.280
	SRR5643528	five period of Gastrodia elata	53.100
	SRR5643658	five period of Gastrodia elata	62.730
	SRR5643659	five period of Gastrodia elata	55.790
	SRR5643660	five period of Gastrodia elata	62.500
	SRR5643661	five period of Gastrodia elata	67.950
	SRR5643662	five period of Gastrodia elata	67.230
	SRR5643663	five period of Gastrodia elata	62.240
	SRR5643664	five period of Gastrodia elata	75.840
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	42.670
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	62.590
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	38.000
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	42.510
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	30.990
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	33.640
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	35.080
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	35.410
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	39.530
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	31.970
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	37.420
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	37.420
SRP279888	Gastro	Gastrodia elata tuber	70.32
	Juven	Juvenile tuber	96.29
	Mother_Gastro	Mother tuber of Gastrodia elata	53.38
	Mother_Juven	Mother tuber of Juvenile	91.03