Detail information of GWHGAAEX016397/evm.TU.scaffold_75.102
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|332796381|ref|YP_004457881.1| | 9.00E-38 | O-sialoglycoprotein endopeptidase domain-containing protein [Acidianus hospitalis W1] |
| KOG | KOG3087 | 6.00E-114 | Serine/threonine protein kinase |
| nr | gi|747079319|ref|XP_011086855.1| | 8.19E-136 | PREDICTED: EKC/KEOPS complex subunit bud32 [Sesamum indicum] |
| trEMBL | tr|A0A067JC42|A0A067JC42_JATCU | 1.00E-131 | Uncharacterized protein {ECO:0000313|EMBL:KDP21421.1} |
| TAIR | AT5G26110 | 6.00E-114 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000072 | 3463470 | 3471440 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016397
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 50 | 161 | 1.90E-10 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | TKL-Pl-4 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004674 | Molecular Function | protein serine/threonine kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 12.040 |
| SRR2545915 | Juvenile tuber | 14.400 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 5.550 |
| SRR5643514 | five period of Gastrodia elata | 4.780 | |
| SRR5643515 | five period of Gastrodia elata | 5.710 | |
| SRR5643524 | five period of Gastrodia elata | 5.380 | |
| SRR5643525 | five period of Gastrodia elata | 7.020 | |
| SRR5643528 | five period of Gastrodia elata | 9.510 | |
| SRR5643658 | five period of Gastrodia elata | 9.560 | |
| SRR5643659 | five period of Gastrodia elata | 6.900 | |
| SRR5643660 | five period of Gastrodia elata | 9.770 | |
| SRR5643661 | five period of Gastrodia elata | 6.720 | |
| SRR5643662 | five period of Gastrodia elata | 9.640 | |
| SRR5643663 | five period of Gastrodia elata | 10.960 | |
| SRR5643664 | five period of Gastrodia elata | 10.110 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 7.570 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 7.060 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 7.610 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 8.940 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 9.510 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 9.040 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 7.470 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 7.060 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 4.920 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 4.760 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 6.660 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 6.660 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 12.66 |
| Juven | Juvenile tuber | 8.91 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 6.61 | |
| Mother_Juven | Mother tuber of Juvenile | 8.12 |