Gene detail

Detail information of GWHGAAEX016398/evm.TU.scaffold_75.103

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG0565	Inositol polyphosphate 5-phosphatase and related proteins
nr	gi\|720000731\|ref\|XP_010256123.1\|	PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like [Nelumbo nucifera]
Swissprot	tr\|Q9LR47\|IP5P3_ARATH	Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2
trEMBL	tr\|B9SFH8\|B9SFH8_RICCO	Type I inositol polyphosphate 5-phosphatase, putative {ECO:0000313\|EMBL:EEF37590.1}
TAIR	AT3G63240	DNAse I-like superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000072	3494602	3498920	+

Transcript Sequence
>GWHTAAEX016398 GGGTTTCAATTAGAAAGAAATTGACTTTTTGGCACAACCGGCTTATGCTTCTCTTGGGATATATGGAGAGCTTCGAGGCATCGTAATAGCCGATTTCAACGAAGAGTACAACTAACTGTCGTCGGGTAGGTCGAGCGCTGCAGAAACTTCAGAGGAAAAGGAAGACCGAGCAGATTCGAGCAGCTTTATTTTTCATTTCTTTTTTTGTGATTTATTTTCTTCCTTTACGGCCGGCCAGTTTTAATTTTTTAATACACGTAAAATTTTAAGTTTTATCTTATTTGGTGACTGACCTTGAACTCTGCGTAGAGAGCCAGAGGGAGAGAGAGCCAAAGCTCTGTTTTTACAGTTGCCTGCATTGCTTTCTTCAGCATTAAAACTTCAATTTTTCACCATCCTTCATATTAAAACTCCAATTTTTACATATCCTCTTCTCTTAGTAGCTTAAAAATTCTATTTTGATCAATCGAATCTGCGCAAAACAAGCATATGACTACTTCCTGGCCACTCTCCTTCTTCTTTTTCATATGTGAAGAGATTCTGCAACAATGAGAGATGAGATTTCTAAGAAAAACAAGCTATCATGGTCTAAGACTCTGGTGAGGAAACTGATCAGTATTAAGAGCAAATCTCAGAGCACTCTGGCTAATGATGGCGTTGGGGAAGAGAGATACTGCAAGAAGAATTCCCATCTAGATTGGCAAGGAAGCTTTGATTGTGCTGAAGCTCAAGTCACTGACACACAGGATTTCAGGTTGTTTGTTGCTACATGGAATGTTGGTGGAAAATCACCACCTAGCTATCTGAATCTTGAGTGGTTGCACTCCTCACCTCCAGCTGATATTTATGTCTTAGGGTTTCAAGAAATAGTTCCTTTGAATGCTGGGAATGTGCTCGGAGCTAAGGACAATGGCCCCGCAAGGAAATGGATCTCTATCATTAAGAAGACATTGAACAATCTTCCCAGCTCTATCTCAAACCCAATAGTTGAGTTAGATGATGACTTCAACCCTTCATCAACAAGGCCAAAGAATTCATCTTTCTTTCATCGCCATTCTCTACAATCTCCCGGCCGTAGGATAAGGATTGATGGTGATACGGCGGTGCATTATTCCGCCCTTAACCGACGGTTAAGCATCTGTGATCGGATTATTTTTGACGAAAGGCCAAGCAATTCTGTTGCCGCCTTGAAATGGAGCTGTTCCTCAGATGATGAAGATGCCAAATTTGAATCACCGGCTACTGTCTTCATGTCACCAATTTCCTGCGGCTACAGAGATCCGTGTAGTTTGGAAGATGGAAAAACCAAAAGAAGGTATTCTTTAGTTGTAAGCAAGCAGATGGTTGGAGTATTCCTCACAGTGTGGGTTAGGTGGGAAATAAGAGATGATGTAAAGAATTTGAAGGTGTCTTGCGTTGGCAGAGGACTGATGGGTTACCTTGGAAATAAGGGTTCAATCTCAGCCAGCATTTCATTGCACAAGACAACCTTTTGCTTCATCTGTAGCCATTTAACATCCGGCCAAAGGGAAGGAGATGAACTCCGGAGGAATGCCGACGTGCTTGAGATTCTAAGAAAGACGAGATTTCCTCGAATTACTGGGCAAGGCGACTTACAGTTGCCAGAAACCATATTAGAACATGATCGAGTGATTTGGCTTGGAGATTTGAATTACAGAATTGCTCTTTCTTATCGATCTGCTAAAGCTCTGATTGAGATGCAGAATTGGAAAGGGTTGCTTGAGAATGATCAGCTTAGAATTGAGCAAAGGAAAGACCGGGTTTTCGCCGGATGGCACGAAGGAAGAATATGTTTTCCTCCGACGTACAAGTACTCGACTAACTCTGATCGCTACGCTAGTTATGACACAAACCCAAATGAGAAACGCCGAACGCCAGCTTGGTGCGACCGCATCTTATGGCATGGAAGAGGAATTTGCCAGTTGTCTTATGCCCGGGGAGAATCGAGGTTTTCGGACCACAGACCTGTCTTCGGCCTCTTCAATGCCAAGGTTGAATCGATAGATTGTAAACGTCTCACGAGAAACATTAACCTGGCGAACTCACGAATAGAAGTTGAAGAGCTCCTGCCTTATCCTAGAGGGCTCACTGAATTTAGTTTCTATTGATTGGGAATGCCAAAATGCAACTAGAAATTGTAAGAGAGCTCAAATTGGAGTCATTCTTTGAAAGATGAAAAAACTGAAATACTAATACAAAATCACTGTCAGACCTACAACTTTGCGAAATAGAGTAGCTAACTGCTAAAATGCACGACAGAAGTTGCAGCATAACTGTGTTTGAAGATTGAGAGTTTATATGAAGATGGATCTCATCACATACGGCTAAGGAATTTGCAAAAATGGCCTTCAAATATTTCAAGGAGAATGATGATTCAGTTCAGTTTCCTTCCTGCATTATGGATGCAAAACTCTTTCAGAAAACAAAGTAGACATGAATTGAAGTTTTGATTTAAGGCCAGCAGAGTTTTATCATAGAGAATAGCTGTAGCATTTGACAGACGACAGAAAACAAATAAAGATGGTGTATTTAATGGAAATTTATCAGTTGTAGCTGCTGCAAGCATCTTTTTTCTTTAAGAAATCAGTTTTTTTACACATCTATAGTGTTCAAAATCATATTTTTTCAAAGCGAGGTTGAGAGAGGCATCATCGCATTTTCTTTTTGATTTGCAGTCGTGACTGGGGCTTTCTTAATTTGTATTTAGCATATGGAAAAAAGGTGTGCAGGGTTTGAGGACTTTCGTCGAACAGTTTGCGTGCATTATAAGTATGGCATTAAACTGTTACAAAAATAATGAAAGAGGAGGAGAAAGTAGTACATGAAGTGAGGACGACGTCGTAATTGGATGAAGAAAAATGTTCATTGTTTTGTAAAATGGTATTTGCTTAACTCATAAAAAAAATGTGCAAGAA

Network for GWHGAAEX016398

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03372.22	Exo_endo_phos	73	478	3.00E-10

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0046856	Biological Process	phosphatidylinositol dephosphorylation

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	20.640
SRP064423	SRR2545915	Juvenile tuber	16.640
SRP108465	SRR5643513	five period of Gastrodia elata	19.530
	SRR5643514	five period of Gastrodia elata	16.940
	SRR5643515	five period of Gastrodia elata	13.480
	SRR5643524	five period of Gastrodia elata	17.110
	SRR5643525	five period of Gastrodia elata	2.330
	SRR5643528	five period of Gastrodia elata	1.380
	SRR5643658	five period of Gastrodia elata	2.580
	SRR5643659	five period of Gastrodia elata	16.240
	SRR5643660	five period of Gastrodia elata	21.690
	SRR5643661	five period of Gastrodia elata	21.580
	SRR5643662	five period of Gastrodia elata	15.890
	SRR5643663	five period of Gastrodia elata	15.470
	SRR5643664	five period of Gastrodia elata	20.930
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	20.830
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	31.400
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	27.520
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.130
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	24.100
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	25.670
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	17.860
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	20.950
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	32.230
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	29.850
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	32.680
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	32.680
SRP279888	Gastro	Gastrodia elata tuber	21.72
	Juven	Juvenile tuber	29.58
	Mother_Gastro	Mother tuber of Gastrodia elata	19.14
	Mother_Juven	Mother tuber of Juvenile	15.81