Detail information of GWHGAAEX016417/evm.TU.scaffold_75.130
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0156 | 1.00E-08 | Cytochrome P450 CYP2 subfamily |
| nr | gi|702482194|ref|XP_010033459.1| | 6.15E-10 | PREDICTED: cytochrome P450 84A1-like [Eucalyptus grandis] |
| Swissprot | tr|Q42600|C84A1_ARATH | 4.00E-09 | Cytochrome P450 84A1 |
| trEMBL | tr|A0A059AGY3|A0A059AGY3_EUCGR | 2.00E-10 | Uncharacterized protein {ECO:0000313|EMBL:KCW53098.1} |
| TAIR | AT4G36220 | 1.00E-08 | ferulic acid 5-hydroxylase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000072 | 4123149 | 4124230 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016417
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 30 | 73 | 1.30E-05 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K09755 | CYP84A, F5H | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0005506 | Molecular Function | iron ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.050 |
| SRR2545915 | Juvenile tuber | 0.920 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.940 |
| SRR5643514 | five period of Gastrodia elata | 2.130 | |
| SRR5643515 | five period of Gastrodia elata | 0.220 | |
| SRR5643524 | five period of Gastrodia elata | 1.140 | |
| SRR5643525 | five period of Gastrodia elata | 1.270 | |
| SRR5643528 | five period of Gastrodia elata | 0.480 | |
| SRR5643658 | five period of Gastrodia elata | 1.440 | |
| SRR5643659 | five period of Gastrodia elata | 1.320 | |
| SRR5643660 | five period of Gastrodia elata | 1.040 | |
| SRR5643661 | five period of Gastrodia elata | 1.050 | |
| SRR5643662 | five period of Gastrodia elata | 1.270 | |
| SRR5643663 | five period of Gastrodia elata | 0.320 | |
| SRR5643664 | five period of Gastrodia elata | 1.550 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.680 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.830 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 1.610 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.540 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.220 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.050 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1.190 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.730 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.650 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1.440 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.460 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.460 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.78 |
| Juven | Juvenile tuber | 1.98 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.12 | |
| Mother_Juven | Mother tuber of Juvenile | 0.65 |