Detail information of GWHGAAEX016419/evm.TU.scaffold_75.132


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|326315275|ref|YP_004232947.1|4.00E-08Kelch repeat type 1-containing protein [Acidovorax avenae subsp. avenae ATCC 19860]
KOGKOG03790Kelch repeat-containing proteins
nrgi|695005076|ref|XP_009388972.1|0PREDICTED: serine/threonine-protein phosphatase BSL2 homolog [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SHS7|BSL3_ARATH0Serine/threonine-protein phosphatase BSL3
trEMBLtr|M0S7I4|M0S7I4_MUSAM0Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}
TAIRAT1G08420_10Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007242268194255981+
Transcript Sequence

Network for GWHGAAEX016419

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13418.5Kelch_42012546.00E-07
PF07646.14Kelch_23073537.10E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.020
SRR2545915Juvenile tuber19.480
SRP108465SRR5643513five period of Gastrodia elata41.920
SRR5643514five period of Gastrodia elata39.990
SRR5643515five period of Gastrodia elata39.200
SRR5643524five period of Gastrodia elata38.140
SRR5643525five period of Gastrodia elata47.710
SRR5643528five period of Gastrodia elata47.440
SRR5643658five period of Gastrodia elata50.060
SRR5643659five period of Gastrodia elata33.570
SRR5643660five period of Gastrodia elata38.790
SRR5643661five period of Gastrodia elata39.970
SRR5643662five period of Gastrodia elata47.700
SRR5643663five period of Gastrodia elata44.480
SRR5643664five period of Gastrodia elata49.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_142.590
SRR6049655Rhizomagastrodiae_C368-T10_good_116.030
SRR6049656Rhizomagastrodiae_C368-T07_good_137.040
SRR6049657Rhizomagastrodiae_C368-T07_good_141.440
SRR6049658Rhizomagastrodiae_C368-T04_good_144.650
SRR6049659Rhizomagastrodiae_C368-T04_good_149.590
SRR6049660Rhizomagastrodiae_C368-T01_good_141.140
SRR6049661Rhizomagastrodiae_C368-T04_good_139.920
SRR6049662Rhizomagastrodiae_C368-T01_good_143.180
SRR6049663Rhizomagastrodiae_C368-T01_good_143.780
SRR6049664Rhizomagastrodiae_C368-T10_good_142.430
SRR6049665Rhizomagastrodiae_C368-T10_good_142.430
SRP279888GastroGastrodia elata tuber 33.44
JuvenJuvenile tuber49.62
Mother_GastroMother tuber of Gastrodia elata 40.39
Mother_JuvenMother tuber of Juvenile 71.25