Gene detail

Detail information of GWHGAAEX016420/evm.TU.scaffold_75.133

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|332796609\|ref\|YP_004458109.1\|	8.00E-41	metallophosphoesterase [Acidianus hospitalis W1]
KOG	KOG0374	0	Serine/threonine specific protein phosphatase PP1, catalytic subunit
nr	gi\|728843375\|gb\|KHG22818.1\|	0	Serine/threonine-protein phosphatase BSL3 -like protein [Gossypium arboreum]
Swissprot	tr\|Q9SHS7\|BSL3_ARATH	0	Serine/threonine-protein phosphatase BSL3
trEMBL	tr\|M5W7B0\|M5W7B0_PRUPE	0	Serine/threonine-protein phosphatase {ECO:0000256\|RuleBase:RU004273}
TAIR	AT1G08420_2	0	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000072	4256160	4268174	+

Transcript Sequence
>GWHTAAEX016420 ATGTATACTGATATAAGCACTGAAAATGCCATGCTTCAAGGACCAAGGAGACTAAGTAAAGGCGTAGAGTATTTGGTTGAAAACTCAGCGGCTGAGGCTGAGGCAATAAGTGCCGCTTTGGCTGCTGCCAAGGCTCGTCAAATTAATGGTGAAGTTGAGCAGTTGCCTGACCGCGATGGTGGTTCAGAGGCTACTCCTAGTGGGAAACAAATGCCGGACTTGGTTAAACCATCAGATTCTCCTATGCCAACTAATACCCCAGCTCTTGGGGTTCGGCTACATCATCGAGCAGTTGTTGTAGCTGCTGAAACTGGGGGAGCTTTGGGGGGGATGGTCAGACAACTTTCTATCGATCAATTTGAGAATGAGGGCAGAAGAGTGAGCTATGGAACTCCTGAGAATGCAACTGCAGCCAGGAAGTTACTAGATCGTCAAATGTCTATTAATAGTGTGCCAAAAAAGGTTATTGCTCATCTTCTGAAGCCCCGTGGTTGGAAGCCTCCTGTACGTAGGCAATTTTTCTTAGACTGCAATGAAATTGCAGATCTCTGTGACAGCGCTGAACGTATATTTTCCAGTGAACCTAGTGTTTTGCAAATTAAAGCTCCTGTTAAAATTTTTGGCGATTTACATGGCCAATTTGGGGATCTCATGCGGTTATTTGATGAGTACGGAGCTCCTTCAACCGCTGGAGATATAGCTTATATTGATTATCTCTTCTTAGGAGATTATGTTGATCGAGGTCAGCATAGTTTGGAAACTATTACCCTTCTTCTTGCTTTAAAGGTCGAGCATCCTCATAATGTTCATTTAATTCGAGGAAACCACGAGGCAGCTGATATTAATGCATTGTTTGGTTTTCGAATAGAATGCATTGAGCGAATGGGAGAACGTGATGGAATTTGGGCTTGGCATCGGATTAATCGATTATTTAACTGGCTTCCATTGGCTGCATTAATTGAAAAAAAAATAATTTGCATGCATGGTGGCATTGGACGGTCCATAAATCATATAGGGCAGATTGAAAACTTACAACGCCCAATTACAATGGAAGCAGGATCTGTAGTTCTTATGGATCTTTTATGGTCTGATCCAACTGAGAATGATAGCGTGGAAGGGTTAAGACCCAATGCCAGAGGCCCCGGCCTTGTTACTTTTGGGCCCGACCGTGTCATGGAATTTTGCAACAACAATGATTTGCAGCTGATAGTTCGTGCGCACGAATGCGTGATGGACGGTTTTGAGAGATTTGCTCAAGGCCATTTGATAACGCTATTCTCGGCAACCAACTATTGCGGCACAGCGAACAATGCGGGAGCCATCTTGGTCTTGGGGAGAGATCTGGTGGTGGTTCCAAAACTCATTCACCCGCTTCCGCCCGCAATCACTTCCCCAGAAACATCCCCGGAGCGCCATATCGAGGATACATGGATGCAGGAGCTCAATGCAAACAGGCCTCCCACCCCAACCCGGGGCCGCCCGCAGGTAGCGAACGACCGGGGTTCTCTTGCTTGGATATGA

Network for GWHGAAEX016420

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00149.27	Metallophos	203	410	1.90E-32

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	40.580
SRP064423	SRR2545915	Juvenile tuber	32.600
SRP108465	SRR5643513	five period of Gastrodia elata	43.240
	SRR5643514	five period of Gastrodia elata	41.210
	SRR5643515	five period of Gastrodia elata	45.540
	SRR5643524	five period of Gastrodia elata	40.730
	SRR5643525	five period of Gastrodia elata	60.140
	SRR5643528	five period of Gastrodia elata	59.210
	SRR5643658	five period of Gastrodia elata	58.630
	SRR5643659	five period of Gastrodia elata	38.140
	SRR5643660	five period of Gastrodia elata	42.250
	SRR5643661	five period of Gastrodia elata	38.780
	SRR5643662	five period of Gastrodia elata	49.950
	SRR5643663	five period of Gastrodia elata	42.340
	SRR5643664	five period of Gastrodia elata	45.110
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	45.170
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	41.510
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	43.120
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	43.600
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	48.320
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	46.980
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	42.630
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	40.140
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	42.630
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	44.700
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	42.220
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	42.220
SRP279888	Gastro	Gastrodia elata tuber	52.57
	Juven	Juvenile tuber	61.88
	Mother_Gastro	Mother tuber of Gastrodia elata	77.84
	Mother_Juven	Mother tuber of Juvenile	93.75