Detail information of GWHGAAEX016428/evm.TU.scaffold_75.146
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|49473744|ref|YP_031786.1| | 1.00E-57 | molecular chaperone DnaJ [Bartonella quintana str. Toulouse] |
| KOG | KOG0712 | 0 | Molecular chaperone (DnaJ superfamily) |
| nr | gi|565400310|ref|XP_006365673.1| | 0 | PREDICTED: dnaJ protein homolog isoform X2 [Solanum tuberosum] |
| Swissprot | tr|Q04960|DNJH_CUCSA | 0 | DnaJ protein homolog (Precursor) |
| trEMBL | tr|A9QTH2|A9QTH2_9ROSI | 0 | DnaJ {ECO:0000313|EMBL:ABX57881.1} |
| TAIR | AT3G44110 | 0 | DNAJ homologue 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000072 | 4458729 | 4470617 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016428
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module3 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00226.30 | DnaJ | 14 | 71 | 2.80E-23 |
| PF01556.17 | DnaJ_C | 122 | 343 | 2.90E-41 |
| PF00684.18 | DnaJ_CXXCXGXG | 148 | 214 | 1.10E-15 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K09503 | DNAJA2 | Protein processing in endoplasmic reticulum | map04141 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006457 | Biological Process | protein folding |
| GO:0009408 | Biological Process | response to heat |
| GO:0051082 | Molecular Function | unfolded protein binding |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0031072 | Molecular Function | heat shock protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 3751.670 |
| SRR2545915 | Juvenile tuber | 3136.940 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 1512.900 |
| SRR5643514 | five period of Gastrodia elata | 1138.690 | |
| SRR5643515 | five period of Gastrodia elata | 1360.950 | |
| SRR5643524 | five period of Gastrodia elata | 1106.170 | |
| SRR5643525 | five period of Gastrodia elata | 1314.360 | |
| SRR5643528 | five period of Gastrodia elata | 1058.240 | |
| SRR5643658 | five period of Gastrodia elata | 1079.900 | |
| SRR5643659 | five period of Gastrodia elata | 3493.990 | |
| SRR5643660 | five period of Gastrodia elata | 3808.690 | |
| SRR5643661 | five period of Gastrodia elata | 4061.090 | |
| SRR5643662 | five period of Gastrodia elata | 4940.830 | |
| SRR5643663 | five period of Gastrodia elata | 4355.950 | |
| SRR5643664 | five period of Gastrodia elata | 6322.260 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2796.160 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1708.310 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2115.550 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 3176.040 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 2781.300 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 3429.010 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 2756.320 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 2663.750 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1732.210 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 2334.850 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1533.470 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1533.470 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 2,643.38 |
| Juven | Juvenile tuber | 2,229.29 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 828.72 | |
| Mother_Juven | Mother tuber of Juvenile | 1,368.23 |