Gene detail

Detail information of GWHGAAEX016429/evm.TU.scaffold_75.147

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|743886842\|ref\|XP_010910245.1\|	PREDICTED: uncharacterized protein LOC105036183 isoform X1 [Elaeis guineensis]
trEMBL	tr\|A0A061EV33\|A0A061EV33_THECC	F26K24.5 protein {ECO:0000313\|EMBL:EOY08523.1}
TAIR	AT3G11760	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000072	4472583	4476627	-

Transcript Sequence
>GWHTAAEX016429 GACCCCTCATCTCCAATAAAAAAAAGGAACAAGAGCTTCTGTCCGTCCTTCTCTCTCTCTGTCTCTCGCTCTCTCGCTCTCTCTCTAATCTTTCTCAAGAAGAACCTCCGGGACCGTCGCCGAAGAGGAAGAAGAAGAAGGCGAAGGAATGTAGGCGGGGATCTGTCCTGCTGAAGGGGATCTAGGGCTAAGTTGTTTACGAGGATGATCCGGTGGCCATGGCTACCGATTGCGCTGAAAAAGTTGGCGGCGAGGCTGGTGGTCCGCTCCATCGAAGGGGTGAGGATCGATCGGACTGCGGCGGAGGGCGTGAGGATGATGACGGTGGAGGTCAGGTGGAAGGGGCCGAGGATCGCGACGCTGAGTTCGTTGAGAAGGAAGGTGAGGAGGAATTGCACCAAGGAGGAGGAGTTGACGGAGGAGAATGGTCGGGTGGTATGGAATGAGGAGTTCGAGAGCACGGTGAGGCTGACGGCGCAGAAGGAGAATCTGTTCATTCCGTGGGTGATTGAATTTGTTGTTTTCTATGGAGGGAAGCAGGTGCCCAAGAACAAGTCATCCTTTGTGGGAATGGCATCTTTGAATCTTGCTGAATATGCATCTTCTTCCGGAGAGGAGTTTGAGCTAAATCTTCCCCTGTTGATGGCAAGCTTTAATGCCGATTCATCGCCTATGCTTCATTTGACCCTCGAATTGCTGGAGTTGAGAAGGAGCCCAGATTCTCCGGAGATTATGCAGAGGCATGTGGCTCCATCTGGTTTGTCTCCTCCACTTGGAGACGCCTCTCTTCGCGAGAAAGATGAGGTTTCTGCTCTCAAAGCTGGACTGAGGAAAGTAAAGATGCTTACAGAGTTTGTGTCAACTAGGAAGTCGAAAAAGTCATCCCGGCGCAACGAAAGCAGTGATGGCGAAGACGCGTATTACCCCTATCAATTCGATACAGATTCTCTGGATGATAATCCCAATGAAGAAATTATAAGAAATTCATTAGGTTATGGCGCGCTAGCAACTGCTAATTGTGTTGATGGCATCTTTTACTGCGACTCAAGCTCTAATGGAGAGTATGAAGACTGTGTCTACCGGAGTTATCGGCGATCCGATATTGAGTATTCCCCTTCGGAGGAGATGGCCTCATCGGTTGCTAAGCAACCTATCAAAAGAAGCATCCTTTCTTGGAGAAAACGGAAATACAGCTTAAGATCTCCGAAGGTGAAAGGGGAGCCTCTGCTAAAGAAGGCTTATGGGGAAGATGGAGGAGATGATATCGACTATGACCGACGGCAGCTGACTTCCTCAGATGAATCCTTCTTTGGAATGGAGCAGAAGGGTGATGATGACCGATCAGTTTCGGTCTCAGATTTTGGTGATGACACTTTTGCGGTGGGAAGCTGGGAGGCGAAAAAGCTTGTAAGCCGAGACGGAAACATGAAGCTCTCAACTGAAGTTTTCTTTGCATCGATTGATCAGAGGAGCGAGCGAGCGGACGGGCAGAGCGCCTGCACGGCTCTGGTCGCCATCATCGCTGACTGGTTCAATTCGAGCAATGGGGCTTTGCCCATCAAATCCCAGCTCGACTCGCTGATTCGGGAAGGCTCCCTGGAGTGGCGGAACCTTTGTGAGAACCAGATGTACAGGGAACGGTTCCCTGACAAGCATTTCGATCTGGAGACAATCATCCAGGCGAAGATCCGGCCTTTGTCCGTCGTCCCCGGGAAGTCATTCGTCGGGTTCTTTAGTCCGGAAGGATGCGAAGATACAGACTGCGGCGGCTTCGAGTTCCTGGATTGCGCCATGTCCTTCGACGGCATATGGGATGAAATAAGTCAGGCCGGATCCGGCGGCCTGTATATAGTCAGCTGGAACGATCACTTCTTCGTTCTCAAAGTCGAACTCAATGCATGCTACATAATAGACACGCTCGGTGAGAGGCTCTATGAGGGTTGCGACCAGGCTTACATACTGAAATTCGACGACAGCACGACAATTCACAGGATTTCGAATCCCGTCTCCGAGGCCGGAGAAGAAGGCGGAGAGGCCCCCCTTAATGGAGGCGGCGAGGAGCTAGTTTGCAGGGGGAAGGAGTCCTGCAAGGAATACATTAAGAGCTTCCTGGCCGCGATCCCCATTAGGGAGCTGCAGGCTGATATCAGGAAGGGATGCGTGGCCTCGCTGCCGCTTCACCGCCTTCTCCAGATCGAGTTTCACTACACCGAGGCCGAGGCCGAGACGAAGACAGATGGCATCGCGAGCCCTGCGGCCGCCTCGCCGCTCTCGTCTCGGGGATCGGCTTCTGCGGATCAATCGCCGGAGAATGTGCCGGCTTGAGGACTCCAGGTTTGTTAACTGTATAGAGCTTTGGTATTTTTGTGTTAATAGGTCGCATACCAGAATAGCAGATTCTTTTTACATGGAAAAGGGAGGGAGGGGTTGCTGCATTCCTAACCATGAGACTAAGTTGTGATCTCTCTCTTGCTGTAAAGAAAAATGTATTTTTGATGATGGTACTGTTGACATCCTTTTTGAGTTCAACTAATAATTTGAAGCTTTGAATCTAATCAAATACTAAAGATAGAAGCTAAAGCCACAATGGCAGCATAGAAGCAAAATCTTCACCTTTTTCTTCTTATATAGATAGGTTGAAAAGAATCACATATGATCATTTGATATGATATTGTATTATATATCTCATTTGCCTTAGATCTTGTTGTGGATAAAAGAAACTTAGGGTTTAAAATTTAGGATCTCATCTTTTGTCATCTTAGTCAATCTTTTTGTATTGGATGTCTCTACAGATCCTACAGAATCTACCCTATGGGTGGCCTAACCTACTATGTATCATTATAATTTTTTTATTTACATATTAAATGTATAATTCTTAGTTTTACAAGATAAATGATACGATGTTCGAGCATTAAATGTCATGATTTTGAGTGAATCTCAATTATTA

Network for GWHGAAEX016429

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10358.8	NT-C2	41	172	4.90E-14

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.530
SRP064423	SRR2545915	Juvenile tuber	7.060
SRP108465	SRR5643513	five period of Gastrodia elata	16.910
	SRR5643514	five period of Gastrodia elata	13.390
	SRR5643515	five period of Gastrodia elata	31.400
	SRR5643524	five period of Gastrodia elata	14.220
	SRR5643525	five period of Gastrodia elata	34.400
	SRR5643528	five period of Gastrodia elata	29.210
	SRR5643658	five period of Gastrodia elata	23.500
	SRR5643659	five period of Gastrodia elata	10.260
	SRR5643660	five period of Gastrodia elata	1.990
	SRR5643661	five period of Gastrodia elata	5.810
	SRR5643662	five period of Gastrodia elata	15.350
	SRR5643663	five period of Gastrodia elata	7.920
	SRR5643664	five period of Gastrodia elata	28.620
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	39.690
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	25.280
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	37.070
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	26.890
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	24.320
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	26.640
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	49.940
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	33.060
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	24.700
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	43.920
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	33.840
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	33.840
SRP279888	Gastro	Gastrodia elata tuber	8.16
	Juven	Juvenile tuber	3.01
	Mother_Gastro	Mother tuber of Gastrodia elata	78.36
	Mother_Juven	Mother tuber of Juvenile	47.07