Detail information of GWHGAAEX016432/evm.TU.scaffold_75.151


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15596490|ref|NP_249984.1|9.00E-56hypothetical protein PA1293 [Pseudomonas aeruginosa PAO1]
KOGKOG15200Predicted alkaloid synthase/Surface mucin Hemomucin
nrgi|743825160|ref|XP_010932965.1|0PREDICTED: strictosidine synthase 3-like [Elaeis guineensis]
Swissprottr|Q8VWF6|SSL3_ARATH0Protein STRICTOSIDINE SYNTHASE-LIKE 3 {ECO:0000303|PubMed:10777701} (Precursor)
trEMBLtr|M0SJ95|M0SJ95_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P30810_001}
TAIRAT1G084700strictosidine synthase-like 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007246230314626400+
Transcript Sequence

Network for GWHGAAEX016432

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03088.15Str_synth1812686.80E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009058Biological Processbiosynthetic process
GO:0016844Molecular Functionstrictosidine synthase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.930
SRR2545915Juvenile tuber29.090
SRP108465SRR5643513five period of Gastrodia elata41.670
SRR5643514five period of Gastrodia elata28.530
SRR5643515five period of Gastrodia elata34.150
SRR5643524five period of Gastrodia elata31.290
SRR5643525five period of Gastrodia elata47.680
SRR5643528five period of Gastrodia elata36.340
SRR5643658five period of Gastrodia elata42.240
SRR5643659five period of Gastrodia elata21.310
SRR5643660five period of Gastrodia elata20.610
SRR5643661five period of Gastrodia elata20.190
SRR5643662five period of Gastrodia elata36.020
SRR5643663five period of Gastrodia elata33.400
SRR5643664five period of Gastrodia elata48.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.950
SRR6049655Rhizomagastrodiae_C368-T10_good_117.410
SRR6049656Rhizomagastrodiae_C368-T07_good_115.140
SRR6049657Rhizomagastrodiae_C368-T07_good_119.680
SRR6049658Rhizomagastrodiae_C368-T04_good_19.420
SRR6049659Rhizomagastrodiae_C368-T04_good_111.160
SRR6049660Rhizomagastrodiae_C368-T01_good_112.500
SRR6049661Rhizomagastrodiae_C368-T04_good_18.790
SRR6049662Rhizomagastrodiae_C368-T01_good_112.610
SRR6049663Rhizomagastrodiae_C368-T01_good_19.230
SRR6049664Rhizomagastrodiae_C368-T10_good_117.990
SRR6049665Rhizomagastrodiae_C368-T10_good_117.990
SRP279888GastroGastrodia elata tuber 50.12
JuvenJuvenile tuber37.14
Mother_GastroMother tuber of Gastrodia elata 35.11
Mother_JuvenMother tuber of Juvenile 35.83