Detail information of GWHGAAEX016433/evm.TU.scaffold_75.152


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108802877|ref|YP_642814.1|2.00E-27serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
KOGKOG00320Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|156072390|gb|ABU45516.1|0calcium-dependent protein kinase 1 [Phalaenopsis amabilis]
Swissprottr|Q06850|CDPK1_ARATH0Calcium-dependent protein kinase 1
trEMBLtr|B2KL91|B2KL91_PHAAB0Calcium-dependent protein kinase 1 {ECO:0000313|EMBL:ABU45516.1}
TAIRAT5G048700calcium dependent protein kinase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007246552634670711+
Transcript Sequence

Network for GWHGAAEX016433

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase1103684.40E-71
PF13499.5EF-hand_74164753.30E-11
PF13499.5EF-hand_74865464.70E-12
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.800
SRR2545915Juvenile tuber24.550
SRP108465SRR5643513five period of Gastrodia elata20.860
SRR5643514five period of Gastrodia elata21.350
SRR5643515five period of Gastrodia elata25.100
SRR5643524five period of Gastrodia elata23.020
SRR5643525five period of Gastrodia elata31.310
SRR5643528five period of Gastrodia elata35.750
SRR5643658five period of Gastrodia elata32.960
SRR5643659five period of Gastrodia elata24.030
SRR5643660five period of Gastrodia elata21.890
SRR5643661five period of Gastrodia elata25.820
SRR5643662five period of Gastrodia elata24.830
SRR5643663five period of Gastrodia elata20.390
SRR5643664five period of Gastrodia elata18.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.130
SRR6049655Rhizomagastrodiae_C368-T10_good_117.260
SRR6049656Rhizomagastrodiae_C368-T07_good_120.260
SRR6049657Rhizomagastrodiae_C368-T07_good_114.830
SRR6049658Rhizomagastrodiae_C368-T04_good_116.820
SRR6049659Rhizomagastrodiae_C368-T04_good_116.120
SRR6049660Rhizomagastrodiae_C368-T01_good_116.570
SRR6049661Rhizomagastrodiae_C368-T04_good_118.220
SRR6049662Rhizomagastrodiae_C368-T01_good_119.170
SRR6049663Rhizomagastrodiae_C368-T01_good_118.410
SRR6049664Rhizomagastrodiae_C368-T10_good_122.690
SRR6049665Rhizomagastrodiae_C368-T10_good_122.690
SRP279888GastroGastrodia elata tuber 19.38
JuvenJuvenile tuber16.51
Mother_GastroMother tuber of Gastrodia elata 32.30
Mother_JuvenMother tuber of Juvenile 28.08