Detail information of GWHGAAEX016441/evm.TU.scaffold_76.2
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|320103696|ref|YP_004179287.1| | 1.00E-23 | serine/threonine protein kinase [Isosphaera pallida ATCC 43644] |
| KOG | KOG0660 | 0 | Mitogen-activated protein kinase |
| nr | gi|242094076|ref|XP_002437528.1| | 0 | hypothetical protein SORBIDRAFT_10g028780 [Sorghum bicolor] |
| Swissprot | tr|Q5Z859|MPK4_ORYSJ | 0 | Mitogen-activated protein kinase 4 |
| trEMBL | tr|C5Z8V4|C5Z8V4_SORBI | 0 | Mitogen-activated protein kinase {ECO:0000256|RuleBase:RU361165} |
| TAIR | AT1G10210 | 0 | mitogen-activated protein kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000077 | 61025 | 65143 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016441
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 33 | 319 | 2.70E-71 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_MAPK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K20535 | MPK1_2 | MAPK signaling pathway - plant | map04016 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004707 | Molecular Function | MAP kinase activity |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 24.940 |
| SRR2545915 | Juvenile tuber | 25.630 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 26.060 |
| SRR5643514 | five period of Gastrodia elata | 18.230 | |
| SRR5643515 | five period of Gastrodia elata | 19.680 | |
| SRR5643524 | five period of Gastrodia elata | 17.110 | |
| SRR5643525 | five period of Gastrodia elata | 49.650 | |
| SRR5643528 | five period of Gastrodia elata | 27.570 | |
| SRR5643658 | five period of Gastrodia elata | 55.970 | |
| SRR5643659 | five period of Gastrodia elata | 18.740 | |
| SRR5643660 | five period of Gastrodia elata | 19.360 | |
| SRR5643661 | five period of Gastrodia elata | 21.090 | |
| SRR5643662 | five period of Gastrodia elata | 25.950 | |
| SRR5643663 | five period of Gastrodia elata | 19.490 | |
| SRR5643664 | five period of Gastrodia elata | 24.560 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 28.310 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 38.290 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 30.870 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 21.320 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 28.210 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 28.360 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 22.510 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 24.480 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 27.280 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 26.380 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 41.510 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 41.510 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 24.99 |
| Juven | Juvenile tuber | 17.54 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 20.55 | |
| Mother_Juven | Mother tuber of Juvenile | 14.74 |