Detail information of GWHGAAEX016445/evm.TU.scaffold_76.7


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695025044|ref|XP_009399759.1|4.49E-47PREDICTED: uncharacterized protein LOC103984069 [Musa acuminata subsp. malaccensis]
trEMBLtr|F6HRZ1|F6HRZ1_VITVI2.00E-44Putative uncharacterized protein {ECO:0000313|EMBL:CCB57450.1}
TAIRAT5G655204.00E-33Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000077251416252637-
Transcript Sequence

Network for GWHGAAEX016445

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.100
SRR2545915Juvenile tuber6.670
SRP108465SRR5643513five period of Gastrodia elata27.510
SRR5643514five period of Gastrodia elata22.140
SRR5643515five period of Gastrodia elata23.110
SRR5643524five period of Gastrodia elata25.520
SRR5643525five period of Gastrodia elata20.210
SRR5643528five period of Gastrodia elata18.840
SRR5643658five period of Gastrodia elata20.950
SRR5643659five period of Gastrodia elata27.270
SRR5643660five period of Gastrodia elata32.910
SRR5643661five period of Gastrodia elata31.610
SRR5643662five period of Gastrodia elata30.190
SRR5643663five period of Gastrodia elata27.920
SRR5643664five period of Gastrodia elata26.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.040
SRR6049655Rhizomagastrodiae_C368-T10_good_145.820
SRR6049656Rhizomagastrodiae_C368-T07_good_131.830
SRR6049657Rhizomagastrodiae_C368-T07_good_132.830
SRR6049658Rhizomagastrodiae_C368-T04_good_130.930
SRR6049659Rhizomagastrodiae_C368-T04_good_134.310
SRR6049660Rhizomagastrodiae_C368-T01_good_132.320
SRR6049661Rhizomagastrodiae_C368-T04_good_128.050
SRR6049662Rhizomagastrodiae_C368-T01_good_123.630
SRR6049663Rhizomagastrodiae_C368-T01_good_132.920
SRR6049664Rhizomagastrodiae_C368-T10_good_134.910
SRR6049665Rhizomagastrodiae_C368-T10_good_134.910
SRP279888GastroGastrodia elata tuber 27.54
JuvenJuvenile tuber31.60
Mother_GastroMother tuber of Gastrodia elata 27.05
Mother_JuvenMother tuber of Juvenile 29.36