Gene detail

Detail information of GWHGAAEX016450/evm.TU.scaffold_76.13

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743767327\|ref\|XP_010913922.1\|	0	PREDICTED: multiple C2 and transmembrane domain-containing protein 2-like [Elaeis guineensis]
Swissprot	tr\|Q9ZVT9\|C2GR1_ARATH	4.00E-13	C2 and GRAM domain-containing protein At1g03370
trEMBL	tr\|V7CZG0\|V7CZG0_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW34291.1}
TAIR	AT3G57880	0	Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000077	509891	513286	-

Transcript Sequence
>GWHTAAEX016450 AATGTGTTATGTTCCTATAAAATATACTATGCATGTGCAAAAACCGACAGCTCTCTCTCTCTCTCATCCCCTTTCTCTCTCATAAGCCGCCTCCATGCTTTTTCTGCTGCGAAGAGGTAGTGCTTTTAGAGCAGGTATGGTTGCTGGTGGACTTCTCCGATCCTGCTGCCCTTTTCTGCGCGGGGTGGATTTTGATTTGAACAGGGTTTGAAATTCCAGCATTCTTTGGAATCAGAACCAAAGCTCCGAGTGCCATTGTTGTACCCTTCGGTTTCTTTAGCAGCTGAAGATGATGCAGAGACCTCTTCGCCCCGAAGATTATTCGCTGAAGCAGACATCTCCTCACCTTGGAGGCGGGAGAGCTGCCGGGGACAAGCTTACAACGACCTATGATCTTGTGGAGCAGATGCAGTATCTGTATGTGCGGGTGGTCAAAGCAAAGGACCTCCCTGCAAAGGATGTTTCTGGCAGCCTTGATCCATATGTGGAGGTGAAACTGGGCAATTACAAGGGGACGACGCGGTATTTCGAGAAGAAGACCAACCCTGAATGGAACCAGGTCTTTGCCTTCTCGAAGGATCGGATCCAAGCTTCTGTTCTTGAGGTTTTGGTCAAGGACAAGGACTTGCTGAAGGATGATTTCGTAGGGAGGATTTCTTTCGATTTGAGTGAGATCCCCAAGAGAGTTCCACCTGACAGCCCATTGGCCCCTCAGTGGTATAGATTGGAAAATAAGAGCGGCGATAAGATCAAAGGAGAGCTGATGCTGGCGATATGGATGGGAACTCAAGCGGACGAGGCGTTCCCCGATGCCTGGAACTCAGATGCCGCGACGATTCCCAGCGATGGCCTTGTTAATATAAGGTCAAAGGTTTATCTCACTCCCAAGCTTTGGTATGTGAGGGTTAATGTACTTGAAGCTCAGGATTTGCAGCTTGGAGACAAGAGCAGGTTTCCTGAGGTATTCGTCAAGGCCTCGCTGGGGAGCCAAACACTCAGGACCAGGGTATCTACTGTGAGGAGCATTAATCCGATGTGGAATGAGGATCTGATGTTTGTGGCCGCTGATCCGTTTGAGGAGCATTTGGTCATAAGCGTGGAGGATAGGGTTGGCCCAAACAAGGAAGAGGTTCTCGGGAAGACGGTCATTCCTCTTCAAAATGTGGATTGCAGGCTGGACTACAAGCCAGTGCCCAGCCGGTGGCACACCATTGAGAAGCTTGTGGTTATTACAGAAGGAGACAAGAAGAAAGAGCTGAAGTTTTCTAGCAGGATCCATCTCAGAATATGCCTGGACGGCGGCTACCATGTCTTAGACGAGTCGACGCATTACAGCAGTGATCTTAGACCAACTGCAAAGCAGCTGTGGAAGCCGAGCATCGGAGTCCTCGAATTAGGCGTCTTGAATGCTCAGGGGTTGCTTCCGATGAAGACCAAGGATGGAAAGGGAACCATTGATGCTTACTGCGTTGCGAAATACGGGCCGAAATGGGTTCGCACTAGGACCATAATCGACAGCTTCACTCCGAGATGGAACGAACAGTACACTTGGGAGGTGTATGATCCTTGCACGGTTGTGACGATAGGCGTTTTCGACAACTGTCACCTGCAAGGTGGCGAGAAGGCTGCGGGGTCGCGGGATTCCAGAATCGGCAAGGTTCGGATCCGGCTTTCGACGCTCGAAACGGATCGAGTCTACACCCACTCGTATCCCTTGCTGGTCCTGCATTCTTCGGGAGTGAAGAAGATGGGAGAAGTGCAGCTCGCCGTCAGGTTCGCGTGCTCCTCGCTTCTCAACATGATGCACATGTACTCAATGCCGCTGCTGCCCAAAATGCACTACCTTTTCCCCCTCTCTGTGACCCAGCTTGATAACCTGAGGCACCAGGCCACCCAGATTGTTTCGATGAGGCTCAGTCGTGCAGAGCCGCCTCTGAGGAAGGAGGTTGTGGAGTATATGCTTGACGTGGACTCTCACATGTGGAGCATGAGAAAGAGCAAGGCTAACTTCTTCAGAATCATGAGTGTGCTGAGTGGCATGATTGCAGTTGGGAAGTGGTTCAATCAAATATGCAATTGGAGGAATCCGTTGACAACAGTGCTCATTCATGTTCTTTTTGTGATATTAGTACTGTACCCAGAGCTCATACTCCCAACAATATGCTTGTATCTGTTCCTGATTGGAGTGTGGTACTACCGGTGGAGGCCGAGGCATCCTCCGCACATGGACACGAGAATCTCGAACGCGGACACAGCGCATCCCGACGAGTTGGATGAGGAATTCGACACCTTTCCGACGTCCAGACCGCCGGATATCGTGAGGATCCGCTACGATCGGCTGAGGAGCGTGGCCGGGAGGATTCAGACAGTCGTTGGGGATCTTGCCACACAGGGTGAGAGGATACAGTCCCTGCTGAGCTGGCGGGATCCCAGAGCAACTGCGCTTTTCGTGATCTTTTGTCTGGTTGCTGCCATAGTGCTGTATGTTACCCCGTTTAGATTGGTTGCTTTTGTGGCTGGATTATATGTGCTGAGGCATCCAAGGTTTAGGCACAAGATGCCTTCTGTTCCTCTTAACTTCTTCAGGAGGCTGCCGGCCAGGACAGACAGTATGTTGTGAGGAGAAGTTTTGTAAGCTTGGTTTGGCCAGATCTGTGTCCTATTTGGCATTTTGTGTTCTGAGATGCTGTGAAAATGATCTGTAGCTTGAACTTCTTCGGTTCCTTTTGTTGCTTTTGCTGTTGGTTTTTGCTGTGATTCCACGATATGTGAACCTGTCTGGTCTTTGTTTGTTGTCTAATGCATATCTTCTTATGGGTCGAATTTCATCTGGTATGCCTTTGTCGTTTTCACCTCGTCTTCAGAAGTTAAATCATTGTCAGCCTTTAATATGCATTTTTTTATATAATCTATCTATCTATATAAAGACATTCATACTGTAAAACATTCCCTCCTACCCAAAAGCCTTCCCAAGGCGGTGAAGGCAAGGCTTCTGGATCCCTCCTTAGGGTTACAAATAAGGC

Network for GWHGAAEX016450

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00168.29	C2	42	135	5.10E-23
PF00168.29	C2	202	306	1.30E-18
PF00168.29	C2	365	476	1.50E-23
PF08372.9	PRT_C	621	776	8.80E-81

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	46.500
SRP064423	SRR2545915	Juvenile tuber	51.150
SRP108465	SRR5643513	five period of Gastrodia elata	50.250
	SRR5643514	five period of Gastrodia elata	54.310
	SRR5643515	five period of Gastrodia elata	33.650
	SRR5643524	five period of Gastrodia elata	43.990
	SRR5643525	five period of Gastrodia elata	30.180
	SRR5643528	five period of Gastrodia elata	25.920
	SRR5643658	five period of Gastrodia elata	28.880
	SRR5643659	five period of Gastrodia elata	73.970
	SRR5643660	five period of Gastrodia elata	81.800
	SRR5643661	five period of Gastrodia elata	70.300
	SRR5643662	five period of Gastrodia elata	56.150
	SRR5643663	five period of Gastrodia elata	64.410
	SRR5643664	five period of Gastrodia elata	56.860
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	76.820
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	59.980
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	80.650
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	64.970
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	46.640
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	45.770
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	67.060
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	60.360
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	75.100
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	67.290
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	67.160
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	67.160
SRP279888	Gastro	Gastrodia elata tuber	47.51
	Juven	Juvenile tuber	55.55
	Mother_Gastro	Mother tuber of Gastrodia elata	35.68
	Mother_Juven	Mother tuber of Juvenile	30.12