Detail information of GWHGAAEX016454/evm.TU.scaffold_76.17
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2516 | 4.00E-96 | Protein involved in dolichol pathway for N-glycosylation (mannosyltransferase family) |
| nr | gi|672125522|ref|XP_008786181.1| | 0 | PREDICTED: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X5 [Phoenix dactylifera] |
| Swissprot | tr|A8MR93|ALG12_ARATH | 0 | Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase |
| trEMBL | tr|M0Y014|M0Y014_HORVD | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_64560.2} |
| TAIR | HS13129114 | 4.00E-96 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000077 | 557648 | 672305 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016454
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03901.16 | Glyco_transf_22 | 39 | 379 | 1.90E-43 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT22 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K03847 | ALG12 | Metabolic pathways | map01100 |
| N-Glycan biosynthesis | map00510 | ||
| Various types of N-glycan biosynthesis | map00513 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016757 | Molecular Function | transferase activity, transferring glycosyl groups |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 18.430 |
| SRR2545915 | Juvenile tuber | 22.440 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 17.950 |
| SRR5643514 | five period of Gastrodia elata | 16.260 | |
| SRR5643515 | five period of Gastrodia elata | 14.680 | |
| SRR5643524 | five period of Gastrodia elata | 16.420 | |
| SRR5643525 | five period of Gastrodia elata | 18.230 | |
| SRR5643528 | five period of Gastrodia elata | 25.040 | |
| SRR5643658 | five period of Gastrodia elata | 22.110 | |
| SRR5643659 | five period of Gastrodia elata | 15.650 | |
| SRR5643660 | five period of Gastrodia elata | 17.850 | |
| SRR5643661 | five period of Gastrodia elata | 18.550 | |
| SRR5643662 | five period of Gastrodia elata | 13.820 | |
| SRR5643663 | five period of Gastrodia elata | 17.890 | |
| SRR5643664 | five period of Gastrodia elata | 16.640 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 23.030 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 23.260 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 20.880 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 22.310 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 24.280 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 23.900 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 20.430 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 20.080 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 22.270 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 21.620 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 21.260 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 21.260 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 22.65 |
| Juven | Juvenile tuber | 26.12 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 18.79 | |
| Mother_Juven | Mother tuber of Juvenile | 24.82 |