Detail information of GWHGAAEX016455/evm.TU.scaffold_76.23_evm.TU.scaffold_76.24


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG15593.00E-147Gamma-glutamyl hydrolase
nrgi|743796360|ref|XP_010924708.1|1.93E-175PREDICTED: LOW QUALITY PROTEIN: gamma-glutamyl hydrolase 2-like [Elaeis guineensis]
Swissprottr|O65355|GGH2_ARATH9.00E-148Gamma-glutamyl hydrolase 2 (Precursor)
trEMBLtr|M0TBX1|M0TBX1_MUSAM3.00E-169Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P31760_001}
TAIRAT1G786803.00E-147gamma-glutamyl hydrolase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007712475201305106+
Transcript Sequence

Network for GWHGAAEX016455

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07722.12Peptidase_C26632799.30E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01307GGH Folate biosynthesis map00790

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity
GO:0008242Molecular Functionomega peptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.270
SRR2545915Juvenile tuber25.400
SRP108465SRR5643513five period of Gastrodia elata33.500
SRR5643514five period of Gastrodia elata39.550
SRR5643515five period of Gastrodia elata35.010
SRR5643524five period of Gastrodia elata40.190
SRR5643525five period of Gastrodia elata63.160
SRR5643528five period of Gastrodia elata83.970
SRR5643658five period of Gastrodia elata82.240
SRR5643659five period of Gastrodia elata15.260
SRR5643660five period of Gastrodia elata18.010
SRR5643661five period of Gastrodia elata16.920
SRR5643662five period of Gastrodia elata13.620
SRR5643663five period of Gastrodia elata16.270
SRR5643664five period of Gastrodia elata11.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.750
SRR6049655Rhizomagastrodiae_C368-T10_good_128.940
SRR6049656Rhizomagastrodiae_C368-T07_good_123.740
SRR6049657Rhizomagastrodiae_C368-T07_good_119.510
SRR6049658Rhizomagastrodiae_C368-T04_good_112.500
SRR6049659Rhizomagastrodiae_C368-T04_good_114.050
SRR6049660Rhizomagastrodiae_C368-T01_good_118.900
SRR6049661Rhizomagastrodiae_C368-T04_good_114.120
SRR6049662Rhizomagastrodiae_C368-T01_good_128.710
SRR6049663Rhizomagastrodiae_C368-T01_good_121.990
SRR6049664Rhizomagastrodiae_C368-T10_good_136.020
SRR6049665Rhizomagastrodiae_C368-T10_good_136.020
SRP279888GastroGastrodia elata tuber 26.77
JuvenJuvenile tuber55.69
Mother_GastroMother tuber of Gastrodia elata 37.15
Mother_JuvenMother tuber of Juvenile 46.40