Detail information of GWHGAAEX016469/evm.TU.scaffold_76.46


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672167510|ref|XP_008803721.1|1.62E-17PREDICTED: cyclic phosphodiesterase-like [Phoenix dactylifera]
Swissprottr|O04147|CPD_ARATH8.00E-13Cyclic phosphodiesterase
trEMBLtr|C5Z196|C5Z196_SORBI9.00E-18Putative uncharacterized protein Sb09g025750 {ECO:0000313|EMBL:EES18513.1}
TAIRAT4G189303.00E-12RNA ligase/cyclic nucleotide phosphodiesterase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007727075432708699-
Transcript Sequence

Network for GWHGAAEX016469

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.990
SRR2545915Juvenile tuber34.040
SRP108465SRR5643513five period of Gastrodia elata9.930
SRR5643514five period of Gastrodia elata10.580
SRR5643515five period of Gastrodia elata4.560
SRR5643524five period of Gastrodia elata10.690
SRR5643525five period of Gastrodia elata10.320
SRR5643528five period of Gastrodia elata12.140
SRR5643658five period of Gastrodia elata9.270
SRR5643659five period of Gastrodia elata10.860
SRR5643660five period of Gastrodia elata11.820
SRR5643661five period of Gastrodia elata8.700
SRR5643662five period of Gastrodia elata11.090
SRR5643663five period of Gastrodia elata8.340
SRR5643664five period of Gastrodia elata8.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.690
SRR6049655Rhizomagastrodiae_C368-T10_good_129.670
SRR6049656Rhizomagastrodiae_C368-T07_good_135.090
SRR6049657Rhizomagastrodiae_C368-T07_good_125.440
SRR6049658Rhizomagastrodiae_C368-T04_good_118.450
SRR6049659Rhizomagastrodiae_C368-T04_good_137.780
SRR6049660Rhizomagastrodiae_C368-T01_good_133.050
SRR6049661Rhizomagastrodiae_C368-T04_good_127.410
SRR6049662Rhizomagastrodiae_C368-T01_good_134.760
SRR6049663Rhizomagastrodiae_C368-T01_good_139.640
SRR6049664Rhizomagastrodiae_C368-T10_good_130.750
SRR6049665Rhizomagastrodiae_C368-T10_good_130.750
SRP279888GastroGastrodia elata tuber 18.96
JuvenJuvenile tuber9.66
Mother_GastroMother tuber of Gastrodia elata 23.40
Mother_JuvenMother tuber of Juvenile 5.92