Detail information of GWHGAAEX016471/evm.TU.scaffold_76.48


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|166368450|ref|YP_001660723.1|2.00E-55hypothetical protein MAE_57090 [Microcystis aeruginosa NIES-843]
nrgi|743756348|ref|XP_010916355.1|2.29E-139PREDICTED: uncharacterized protein LOC105041191 [Elaeis guineensis]
trEMBLtr|M0TXS8|M0TXS8_MUSAM1.00E-125Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P05690_001}
TAIRAT1G786207.00E-120Protein of unknown function DUF92, transmembrane

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007727101112775955-
Transcript Sequence

Network for GWHGAAEX016471

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01940.15DUF921253384.90E-43
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms89.610
SRR2545915Juvenile tuber118.020
SRP108465SRR5643513five period of Gastrodia elata69.720
SRR5643514five period of Gastrodia elata67.850
SRR5643515five period of Gastrodia elata65.660
SRR5643524five period of Gastrodia elata60.620
SRR5643525five period of Gastrodia elata46.240
SRR5643528five period of Gastrodia elata35.990
SRR5643658five period of Gastrodia elata38.650
SRR5643659five period of Gastrodia elata152.550
SRR5643660five period of Gastrodia elata187.580
SRR5643661five period of Gastrodia elata194.210
SRR5643662five period of Gastrodia elata265.280
SRR5643663five period of Gastrodia elata213.240
SRR5643664five period of Gastrodia elata298.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_186.810
SRR6049655Rhizomagastrodiae_C368-T10_good_169.640
SRR6049656Rhizomagastrodiae_C368-T07_good_176.870
SRR6049657Rhizomagastrodiae_C368-T07_good_192.440
SRR6049658Rhizomagastrodiae_C368-T04_good_181.120
SRR6049659Rhizomagastrodiae_C368-T04_good_187.700
SRR6049660Rhizomagastrodiae_C368-T01_good_182.530
SRR6049661Rhizomagastrodiae_C368-T04_good_180.470
SRR6049662Rhizomagastrodiae_C368-T01_good_163.940
SRR6049663Rhizomagastrodiae_C368-T01_good_167.940
SRR6049664Rhizomagastrodiae_C368-T10_good_167.970
SRR6049665Rhizomagastrodiae_C368-T10_good_167.970
SRP279888GastroGastrodia elata tuber 169.80
JuvenJuvenile tuber81.13
Mother_GastroMother tuber of Gastrodia elata 26.93
Mother_JuvenMother tuber of Juvenile 51.92