Detail information of GWHGAAEX016473/evm.TU.scaffold_76.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672181883|ref|XP_008811174.1|0PREDICTED: probable pectin methyltransferase QUA2 [Phoenix dactylifera]
Swissprottr|Q9C9Q8|PMTT_ARATH0Probable pectin methyltransferase QUA2
trEMBLtr|M0TH04|M0TH04_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P12660_001}
TAIRAT1G782400S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007733049353348931+
Transcript Sequence

Network for GWHGAAEX016473

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03141.15Methyltransf_29214227.90E-126
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008168Molecular Functionmethyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.610
SRR2545915Juvenile tuber19.650
SRP108465SRR5643513five period of Gastrodia elata19.620
SRR5643514five period of Gastrodia elata9.280
SRR5643515five period of Gastrodia elata22.660
SRR5643524five period of Gastrodia elata10.510
SRR5643525five period of Gastrodia elata10.190
SRR5643528five period of Gastrodia elata7.860
SRR5643658five period of Gastrodia elata9.280
SRR5643659five period of Gastrodia elata20.150
SRR5643660five period of Gastrodia elata14.940
SRR5643661five period of Gastrodia elata23.370
SRR5643662five period of Gastrodia elata14.870
SRR5643663five period of Gastrodia elata19.830
SRR5643664five period of Gastrodia elata9.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.860
SRR6049655Rhizomagastrodiae_C368-T10_good_110.370
SRR6049656Rhizomagastrodiae_C368-T07_good_110.930
SRR6049657Rhizomagastrodiae_C368-T07_good_18.620
SRR6049658Rhizomagastrodiae_C368-T04_good_16.710
SRR6049659Rhizomagastrodiae_C368-T04_good_17.530
SRR6049660Rhizomagastrodiae_C368-T01_good_19.450
SRR6049661Rhizomagastrodiae_C368-T04_good_18.120
SRR6049662Rhizomagastrodiae_C368-T01_good_19.380
SRR6049663Rhizomagastrodiae_C368-T01_good_19.190
SRR6049664Rhizomagastrodiae_C368-T10_good_18.920
SRR6049665Rhizomagastrodiae_C368-T10_good_18.920
SRP279888GastroGastrodia elata tuber 11.77
JuvenJuvenile tuber10.31
Mother_GastroMother tuber of Gastrodia elata 4.48
Mother_JuvenMother tuber of Juvenile 3.63