Detail information of GWHGAAEX016480/evm.TU.scaffold_76.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG28670Phosphotyrosyl phosphatase activator
nrgi|743849617|ref|XP_010939672.1|0PREDICTED: serine/threonine-protein phosphatase 2A activator-like isoform X1 [Elaeis guineensis]
trEMBLtr|R0FCA2|R0FCA2_9BRAS0Serine/threonine-protein phosphatase 2A activator {ECO:0000256|RuleBase:RU361210} (Fragment)
TAIRAT4G089600phosphotyrosyl phosphatase activator (PTPA) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007735777263594850+
Transcript Sequence

Network for GWHGAAEX016480

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03095.14PTPA1063981.90E-118
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0019211Molecular Functionphosphatase activator activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.050
SRR2545915Juvenile tuber27.820
SRP108465SRR5643513five period of Gastrodia elata51.270
SRR5643514five period of Gastrodia elata51.370
SRR5643515five period of Gastrodia elata52.220
SRR5643524five period of Gastrodia elata50.140
SRR5643525five period of Gastrodia elata46.830
SRR5643528five period of Gastrodia elata56.320
SRR5643658five period of Gastrodia elata56.070
SRR5643659five period of Gastrodia elata57.690
SRR5643660five period of Gastrodia elata53.970
SRR5643661five period of Gastrodia elata61.720
SRR5643662five period of Gastrodia elata76.640
SRR5643663five period of Gastrodia elata66.390
SRR5643664five period of Gastrodia elata63.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_158.200
SRR6049655Rhizomagastrodiae_C368-T10_good_196.560
SRR6049656Rhizomagastrodiae_C368-T07_good_164.620
SRR6049657Rhizomagastrodiae_C368-T07_good_147.820
SRR6049658Rhizomagastrodiae_C368-T04_good_152.380
SRR6049659Rhizomagastrodiae_C368-T04_good_143.520
SRR6049660Rhizomagastrodiae_C368-T01_good_145.580
SRR6049661Rhizomagastrodiae_C368-T04_good_155.240
SRR6049662Rhizomagastrodiae_C368-T01_good_180.700
SRR6049663Rhizomagastrodiae_C368-T01_good_165.450
SRR6049664Rhizomagastrodiae_C368-T10_good_187.260
SRR6049665Rhizomagastrodiae_C368-T10_good_187.260
SRP279888GastroGastrodia elata tuber 67.74
JuvenJuvenile tuber79.29
Mother_GastroMother tuber of Gastrodia elata 35.90
Mother_JuvenMother tuber of Juvenile 53.94