Detail information of GWHGAAEX016482/evm.TU.scaffold_76.62
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|116626554|ref|YP_828710.1| | 2.00E-16 | serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076] |
| KOG | KOG0192 | 0 | Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs |
| nr | gi|743755929|ref|XP_010914091.1| | 0 | PREDICTED: serine/threonine-protein kinase HSL1-like [Elaeis guineensis] |
| Swissprot | tr|P25848|PHY1_CERPU | 4.00E-37 | Protein kinase |
| trEMBL | tr|M0TTG1|M0TTG1_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P25080_001} |
| TAIR | AT5G41730 | 0 | Protein kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000077 | 3668784 | 3671338 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016482
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF06760.10 | DUF1221 | 21 | 227 | 1.30E-80 |
| PF07714.16 | Pkinase_Tyr | 263 | 497 | 3.50E-39 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | TKL_Gdt |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 4.460 |
| SRR2545915 | Juvenile tuber | 1.710 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 4.840 |
| SRR5643514 | five period of Gastrodia elata | 6.860 | |
| SRR5643515 | five period of Gastrodia elata | 5.000 | |
| SRR5643524 | five period of Gastrodia elata | 5.040 | |
| SRR5643525 | five period of Gastrodia elata | 2.350 | |
| SRR5643528 | five period of Gastrodia elata | 1.760 | |
| SRR5643658 | five period of Gastrodia elata | 1.670 | |
| SRR5643659 | five period of Gastrodia elata | 3.260 | |
| SRR5643660 | five period of Gastrodia elata | 4.050 | |
| SRR5643661 | five period of Gastrodia elata | 3.990 | |
| SRR5643662 | five period of Gastrodia elata | 3.270 | |
| SRR5643663 | five period of Gastrodia elata | 3.220 | |
| SRR5643664 | five period of Gastrodia elata | 5.360 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 5.650 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 4.070 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.020 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.660 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.660 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 5.750 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.230 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.390 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 7.790 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 12.630 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 10.930 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 10.930 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 2.90 |
| Juven | Juvenile tuber | 2.65 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.28 | |
| Mother_Juven | Mother tuber of Juvenile | 3.43 |