Detail information of GWHGAAEX016489/evm.TU.scaffold_76.70


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|333985970|ref|YP_004515180.1|7.00E-38glucan 1,3-beta-glucosidase [Methylomonas methanica MC09]
nrgi|743859209|ref|XP_010942633.1|0PREDICTED: probable glucan 1,3-beta-glucosidase A [Elaeis guineensis]
trEMBLtr|M0TIU5|M0TIU5_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P19080_001}
TAIRSPBC1105.051.00E-32Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007741358594167775+
Transcript Sequence

Network for GWHGAAEX016489

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00150.17Cellulase2204791.30E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.260
SRR2545915Juvenile tuber8.270
SRP108465SRR5643513five period of Gastrodia elata56.790
SRR5643514five period of Gastrodia elata99.420
SRR5643515five period of Gastrodia elata93.530
SRR5643524five period of Gastrodia elata83.550
SRR5643525five period of Gastrodia elata6.980
SRR5643528five period of Gastrodia elata10.550
SRR5643658five period of Gastrodia elata11.540
SRR5643659five period of Gastrodia elata12.060
SRR5643660five period of Gastrodia elata7.500
SRR5643661five period of Gastrodia elata15.140
SRR5643662five period of Gastrodia elata5.080
SRR5643663five period of Gastrodia elata6.300
SRR5643664five period of Gastrodia elata4.050
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1109.780
SRR6049655Rhizomagastrodiae_C368-T10_good_1151.920
SRR6049656Rhizomagastrodiae_C368-T07_good_199.180
SRR6049657Rhizomagastrodiae_C368-T07_good_150.040
SRR6049658Rhizomagastrodiae_C368-T04_good_173.490
SRR6049659Rhizomagastrodiae_C368-T04_good_171.080
SRR6049660Rhizomagastrodiae_C368-T01_good_142.090
SRR6049661Rhizomagastrodiae_C368-T04_good_149.830
SRR6049662Rhizomagastrodiae_C368-T01_good_197.440
SRR6049663Rhizomagastrodiae_C368-T01_good_188.320
SRR6049664Rhizomagastrodiae_C368-T10_good_1244.540
SRR6049665Rhizomagastrodiae_C368-T10_good_1244.540
SRP279888GastroGastrodia elata tuber 10.45
JuvenJuvenile tuber8.04
Mother_GastroMother tuber of Gastrodia elata 37.08
Mother_JuvenMother tuber of Juvenile 56.53