Detail information of GWHGAAEX016496/evm.TU.scaffold_77.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|83646416|ref|YP_434851.1|1.00E-1392-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component subunit alpha [Hahella chejuensis KCTC 2396]
KOGKOG11820Branched chain alpha-keto acid dehydrogenase complex, alpha subunit
nrgi|743816483|ref|XP_010930656.1|0PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial isoform X2 [Elaeis guineensis]
Swissprottr|Q84JL2|ODBA2_ARATH02-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial (Precursor)
trEMBLtr|K3Y7Z3|K3Y7Z3_SETIT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Si010334m}
TAIRAT5G093000Thiamin diphosphate-binding fold (THDP-binding) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000752712239870+
Transcript Sequence

Network for GWHGAAEX016496

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00676.19E1_dh483442.70E-95
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00166BCKDHA, bkdA1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Propanoate metabolismmap00640
Cysteine and methionine metabolismmap00270

Gene Ontology

GO term OntologyName
GO:0016624Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.550
SRR2545915Juvenile tuber23.370
SRP108465SRR5643513five period of Gastrodia elata40.940
SRR5643514five period of Gastrodia elata49.910
SRR5643515five period of Gastrodia elata41.220
SRR5643524five period of Gastrodia elata50.510
SRR5643525five period of Gastrodia elata25.810
SRR5643528five period of Gastrodia elata21.480
SRR5643658five period of Gastrodia elata32.690
SRR5643659five period of Gastrodia elata22.420
SRR5643660five period of Gastrodia elata22.460
SRR5643661five period of Gastrodia elata26.920
SRR5643662five period of Gastrodia elata15.880
SRR5643663five period of Gastrodia elata23.460
SRR5643664five period of Gastrodia elata20.730
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_146.260
SRR6049655Rhizomagastrodiae_C368-T10_good_132.640
SRR6049656Rhizomagastrodiae_C368-T07_good_147.630
SRR6049657Rhizomagastrodiae_C368-T07_good_144.520
SRR6049658Rhizomagastrodiae_C368-T04_good_149.440
SRR6049659Rhizomagastrodiae_C368-T04_good_155.070
SRR6049660Rhizomagastrodiae_C368-T01_good_143.330
SRR6049661Rhizomagastrodiae_C368-T04_good_142.760
SRR6049662Rhizomagastrodiae_C368-T01_good_139.950
SRR6049663Rhizomagastrodiae_C368-T01_good_146.580
SRR6049664Rhizomagastrodiae_C368-T10_good_149.830
SRR6049665Rhizomagastrodiae_C368-T10_good_149.830
SRP279888GastroGastrodia elata tuber 23.15
JuvenJuvenile tuber45.33
Mother_GastroMother tuber of Gastrodia elata 51.40
Mother_JuvenMother tuber of Juvenile 40.32