Detail information of GWHGAAEX016497/evm.TU.scaffold_77.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|162147864|ref|YP_001602325.1|1.00E-10PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
nrgi|672176811|ref|XP_008808483.1|0PREDICTED: uncharacterized protein LOC103720522 isoform X1 [Phoenix dactylifera]
Swissprottr|O49285|ACR3_ARATH0ACT domain-containing protein ACR3 {ECO:0000305}
trEMBLtr|M0TYK9|M0TYK9_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P08500_001}
TAIRAT1G769900ACT domain repeat 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000755861673350+
Transcript Sequence

Network for GWHGAAEX016497

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01842.24ACT1302002.10E-10
PF01842.24ACT3433937.20E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.330
SRR2545915Juvenile tuber14.140
SRP108465SRR5643513five period of Gastrodia elata23.550
SRR5643514five period of Gastrodia elata21.100
SRR5643515five period of Gastrodia elata21.810
SRR5643524five period of Gastrodia elata15.700
SRR5643525five period of Gastrodia elata40.200
SRR5643528five period of Gastrodia elata82.260
SRR5643658five period of Gastrodia elata53.770
SRR5643659five period of Gastrodia elata11.780
SRR5643660five period of Gastrodia elata11.780
SRR5643661five period of Gastrodia elata20.470
SRR5643662five period of Gastrodia elata9.770
SRR5643663five period of Gastrodia elata25.050
SRR5643664five period of Gastrodia elata15.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.050
SRR6049655Rhizomagastrodiae_C368-T10_good_19.140
SRR6049656Rhizomagastrodiae_C368-T07_good_17.900
SRR6049657Rhizomagastrodiae_C368-T07_good_18.990
SRR6049658Rhizomagastrodiae_C368-T04_good_15.410
SRR6049659Rhizomagastrodiae_C368-T04_good_110.120
SRR6049660Rhizomagastrodiae_C368-T01_good_17.670
SRR6049661Rhizomagastrodiae_C368-T04_good_16.600
SRR6049662Rhizomagastrodiae_C368-T01_good_16.880
SRR6049663Rhizomagastrodiae_C368-T01_good_15.230
SRR6049664Rhizomagastrodiae_C368-T10_good_17.310
SRR6049665Rhizomagastrodiae_C368-T10_good_17.310
SRP279888GastroGastrodia elata tuber 18.69
JuvenJuvenile tuber12.98
Mother_GastroMother tuber of Gastrodia elata 64.34
Mother_JuvenMother tuber of Juvenile 63.39