Detail information of GWHGAAEX016504/evm.TU.scaffold_77.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|414870270|tpg|DAA48827.1|6.57E-38TPA: SAUR33-auxin-responsive SAUR family member [Zea mays]
trEMBLtr|A0A096TX29|A0A096TX29_MAIZE2.00E-38Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G460861_P01}
TAIRAT1G724302.00E-22SAUR-like auxin-responsive protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000075322362322961-
Transcript Sequence

Network for GWHGAAEX016504

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module10

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.13Auxin_inducible20943.90E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009733Biological Processresponse to auxin

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.000
SRR2545915Juvenile tuber9.380
SRP108465SRR5643513five period of Gastrodia elata36.540
SRR5643514five period of Gastrodia elata28.740
SRR5643515five period of Gastrodia elata19.670
SRR5643524five period of Gastrodia elata16.200
SRR5643525five period of Gastrodia elata79.230
SRR5643528five period of Gastrodia elata25.830
SRR5643658five period of Gastrodia elata84.480
SRR5643659five period of Gastrodia elata14.400
SRR5643660five period of Gastrodia elata7.100
SRR5643661five period of Gastrodia elata8.190
SRR5643662five period of Gastrodia elata8.690
SRR5643663five period of Gastrodia elata13.240
SRR5643664five period of Gastrodia elata5.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_165.950
SRR6049655Rhizomagastrodiae_C368-T10_good_1217.610
SRR6049656Rhizomagastrodiae_C368-T07_good_1113.240
SRR6049657Rhizomagastrodiae_C368-T07_good_160.520
SRR6049658Rhizomagastrodiae_C368-T04_good_148.780
SRR6049659Rhizomagastrodiae_C368-T04_good_123.030
SRR6049660Rhizomagastrodiae_C368-T01_good_135.780
SRR6049661Rhizomagastrodiae_C368-T04_good_169.110
SRR6049662Rhizomagastrodiae_C368-T01_good_185.580
SRR6049663Rhizomagastrodiae_C368-T01_good_139.740
SRR6049664Rhizomagastrodiae_C368-T10_good_192.070
SRR6049665Rhizomagastrodiae_C368-T10_good_192.070
SRP279888GastroGastrodia elata tuber 12.79
JuvenJuvenile tuber15.88
Mother_GastroMother tuber of Gastrodia elata 8.43
Mother_JuvenMother tuber of Juvenile 1.60