Detail information of GWHGAAEX016509/evm.TU.scaffold_77.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25681.00E-10Predicted membrane protein
nrgi|672122028|ref|XP_008784333.1|3.16E-16PREDICTED: transmembrane protein 87B-like [Phoenix dactylifera]
trEMBLtr|K4DFL9|K4DFL9_SOLLC3.00E-14Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc12g049390.1.1}
TAIRAT1G724801.00E-10Lung seven transmembrane receptor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000075485440485721-
Transcript Sequence

Network for GWHGAAEX016509

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.300
SRR2545915Juvenile tuber22.580
SRP108465SRR5643513five period of Gastrodia elata30.380
SRR5643514five period of Gastrodia elata31.320
SRR5643515five period of Gastrodia elata29.930
SRR5643524five period of Gastrodia elata25.080
SRR5643525five period of Gastrodia elata17.720
SRR5643528five period of Gastrodia elata16.700
SRR5643658five period of Gastrodia elata19.270
SRR5643659five period of Gastrodia elata32.650
SRR5643660five period of Gastrodia elata33.390
SRR5643661five period of Gastrodia elata39.270
SRR5643662five period of Gastrodia elata28.750
SRR5643663five period of Gastrodia elata30.210
SRR5643664five period of Gastrodia elata29.200
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.310
SRR6049655Rhizomagastrodiae_C368-T10_good_149.330
SRR6049656Rhizomagastrodiae_C368-T07_good_125.590
SRR6049657Rhizomagastrodiae_C368-T07_good_119.850
SRR6049658Rhizomagastrodiae_C368-T04_good_122.630
SRR6049659Rhizomagastrodiae_C368-T04_good_126.810
SRR6049660Rhizomagastrodiae_C368-T01_good_127.300
SRR6049661Rhizomagastrodiae_C368-T04_good_130.490
SRR6049662Rhizomagastrodiae_C368-T01_good_158.680
SRR6049663Rhizomagastrodiae_C368-T01_good_122.490
SRR6049664Rhizomagastrodiae_C368-T10_good_135.020
SRR6049665Rhizomagastrodiae_C368-T10_good_135.020
SRP279888GastroGastrodia elata tuber 37.26
JuvenJuvenile tuber25.08
Mother_GastroMother tuber of Gastrodia elata 38.37
Mother_JuvenMother tuber of Juvenile 26.30