Gene detail

Detail information of GWHGAAEX016511/evm.TU.scaffold_77.20

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000075	601349	682740	+

Transcript Sequence
>GWHTAAEX016511 GCAATCTTCCCGAGCACGCTTTTTCCTCCTTACATCCGACCCTGTGCGCGATATTACTCTTCTCCACCGCGATTTTCCTTTTTGTGTCAATCGTGTTCTAATGAAGGGACCACTCGTTAGTTCTAATAAGCTGTCACGACCTGTGTATCACTGTTTTGGCAAGGAAGGCTTAGAGAAACTTTTGAAAGAGCATTTTGGCTATTCTGGATTTCGGGGAAGGCAGCTGGAGGCTATTGAAGCTTCTTTATCAGGAAGGGATTGCTTTTGCCTTATGCCAACAGGGGGAGGAAAGTCCATGTGCTATCAGATTCCCTCACTGGCAACTTCAGGCATTGTGCTTGTAATTTCTCCATTAATTGCGTTAATGGAAAATCAGGTTATGGTGTTAAAGGCAAAGGGGATTCATGCTGAGTTTTTTTCAGCAACGCAGATGGCTTGTACTAAAGAGAAGATACATGAAGATCTCAACTCAAAAAATCCCTCTGTTAAGCTGTTGTATGTGACTCCAGAACTGATTGCTACATCAGGATTTAGTGCAAAGCTGATAAGTCTTTACAACAGAGGGCTGCTTAGTCTAATTGCTGTTGACGAGGCGCATTGTATTTCTACATGGGGCCATGACTTCAGGCCTAGTTACCGGAAACTAACTTCTTTGAGGGATCATATTCCAGGTGTTCCAATAATAGCATTAACAGCTACTGCTGCTTCTAAGGTTCAGGAAGATGTAGTCAAGTCACTACAGCTACGGAATCCATTGATTCTCAGGACATCATTTAACCGTCCTAATATACACTACGAAGTTAGATTCAAGGATATTCTAAATGATGTGTTTACTGATTTGTCAAATCTACTCAAATCTAGTGGTGAGGCTGTTTGCGCCATTATATATTGCCTCGAACGGTCTGCTTGTGATGAATTGTCTTCACGCCTATCAAAGAATGGCATCTCTTCAGCTGCTTATCATGCTGGGCTGAACAGTAGAATGAGAAGCGCTGTTTTAGATGATTGGCTCTCTTCCAGAACAAATGTTGTTGTTGCAACAGGTATTGACAGAAAAGATGTTCGAGTTGTTTGTCATTTTAACATTCCAAAGTCCATGGAAGCTTTCTATCAAGAATCTGGAAGAGCTGGCCGTGATCAGCAACCCTCAAGAAGTGTGCTATATTATGGCCTGGATGACCGTAAAAGAATGGAATTTATCTTAAGTAATGGTGTTAAAAAGAAAATACAATCTTTGAGTTCCTCAGAGGAGCTCTTGAAGAAGCCCCTTGCAGATTTCAAAGAGATGGTGGCCTATTGTGAAGGTTCTGGCTGTCGTAGGCAAAAGATACTTCAAAATTTTGGAGAACATGCACCTGCATCACTTTGTCAAAAATCATGTGATGCGTGTAAACATCCATCACTACTTTCAACGAATTTGGCAGACCTTGAATGGAAAGGTAACATTTTCAGAAAGGGAGGACTTGCTCCTGTTTTTCTTCAAAGATCGTTTGTTACTGCACCAAGCACCGCAAGTGAATTTTGGAATCAAGAGGAAGAGAACTCTGATGAAGACATATCAGAATCTGAAGATGAAGCCCTAGCTTTGACAGGTTCGGCAAGATCCAGCATATCATCAAAAGCTAGTCTAGATGAGAAATTTGAAGCTTTACAACGTGCAGAGGAAAGCTATTATCAAAATAAAGGCCAAAGCAAGCAGATTAAGAACGGGCTTGCTGACAGAAACACAATCTCGGAGGCATTAAGAGAGGCAGCCAAGAAGAGAATTTTAAATGCTCTGAACCAAGTCATTGAACGGTCGGGAAGCCATTCGTTGGACGCCGAATCTTCGGCGGGCTCGCTCGAATCGGAGTGCTTCAAGAAGTACGAGAAGGTTGGAAAAAGCTTCTATAATTCTCAGATTGCTGCGACTGTGAGGTGGCTGTCATCGGCAAGCTGTGAGCAGATAGCGGAGAGGTTCAGCAGAAGAAAATCCGCCCCTTCCGATGAGTGCGTTCATAAGCTGAAAGCGTTTGGAAGCGCTTCCGATTCGGCCAATGAGGTGAAAAAGGCTAGTGAAATAATATACGTCCGTGAATCCCATGCAGCAGCAGCAGCAGCAGCAACAGCAATGGAGATTTTGCACCGAAAAAAGGAGGATCTCCCGTCAATAGCGTCATTTTCTGAGTTCGTCAGGCAGAGAGAGAGCGGAAGTGCTTCGAAGAGGAGGAGAGCTGAAGATGGGAAGGGTTGCTGA

Network for GWHGAAEX016511

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.110
SRP064423	SRR2545915	Juvenile tuber	6.260
SRP108465	SRR5643513	five period of Gastrodia elata	3.930
	SRR5643514	five period of Gastrodia elata	4.980
	SRR5643515	five period of Gastrodia elata	4.670
	SRR5643524	five period of Gastrodia elata	4.420
	SRR5643525	five period of Gastrodia elata	1.230
	SRR5643528	five period of Gastrodia elata	1.510
	SRR5643658	five period of Gastrodia elata	1.450
	SRR5643659	five period of Gastrodia elata	4.100
	SRR5643660	five period of Gastrodia elata	6.070
	SRR5643661	five period of Gastrodia elata	3.720
	SRR5643662	five period of Gastrodia elata	5.440
	SRR5643663	five period of Gastrodia elata	5.380
	SRR5643664	five period of Gastrodia elata	3.910
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.180
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.350
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.030
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.180
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.230
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.670
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.850
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.340
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.720
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.660
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.380
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.380
SRP279888	Gastro	Gastrodia elata tuber	5.08
	Juven	Juvenile tuber	7.32
	Mother_Gastro	Mother tuber of Gastrodia elata	3.15
	Mother_Juven	Mother tuber of Juvenile	6.01