Gene detail

Detail information of GWHGAAEX016512/evm.TU.scaffold_77.21

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|387790204\|ref\|YP_006255269.1\|	2.00E-180	NAD-dependent aldehyde dehydrogenase [Solitalea canadensis DSM 3403]
KOG	KOG2453	0	Aldehyde dehydrogenase
nr	gi\|743774272\|ref\|XP_010917487.1\|	0	PREDICTED: aldehyde dehydrogenase family 7 member A1 [Elaeis guineensis]
Swissprot	tr\|Q9SYG7\|AL7B4_ARATH	0	Aldehyde dehydrogenase family 7 member B4
trEMBL	tr\|A0A0A0K9F9\|A0A0A0K9F9_CUCSA	0	Uncharacterized protein {ECO:0000313\|EMBL:KGN45479.1}
TAIR	AT1G54100	0	aldehyde dehydrogenase 7B4

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000075	683481	716388	-

Transcript Sequence
>GWHTAAEX016512 GTGTAAATTATGAGCTTGAAGTCCCACACTGACCTCAAAATCGAAATCACCCAATTTCCATATTGCAAATTTCGGAGCTTCCATCACCACAGTAAGCCGCTTCAAGTTCCAACAGAGCATCCTGCAAAAGTAATCTCTTCCTCCGGGCACGAACCAAAACACGGATGGTGTTTCCAAAAGAAGAGTATCAGTTCCTTTCAGAGATAGGCCTTGACTACCGGAACACCGGCTGTTATCTGAACGGCTCATGGAGAGGGAGTGGTCCTGTCGTCCCTTCGCTGAATCCCGCTAATAACGAGGTTATTGCTGAAGTGTTAGAGGCTTCACTTGACGACTACAAGGAAGGGATGAAGGCCTGTGCTGATGCTTCTAAGATATGGAGGCAGCTTTCAGCTCCAAAGAGGGGTGAAATTGTTAGGCAAATTGGCGATGCATTGAGAGCTAAAGTCCAGCACCTTGGCAGGCTTGTTTCACTTGAGATGGGAAAAATACTACCTGAAGGGATTGGTGAAGTACAAGAAATTATTGATATGTGCGACTTTGCTGTTGGGCTGAGTAGACAACTAAATGGATCAGTTATACCTTCAGAACGTCCAAATCACATGATGATGGAGATTTGGAATCCTTTAGGGGTAGTGGGTGTTATTACTGCCTTCAACTTCCCATGTGCTGTGCTTGGATGGAATGCCTGCATTGCACTGGTGTGTGGAAACTGTGTTGTTTGGAAAGGCGCACCAACAACTCCACTAATCACTATTGCTATGACTAAACTAATTGCTGGAGTTTTGGAGAAAAACAATTTACCAGGTGCGATTTTTACAACATTTTGTGGAGGTGCTGAAATTGGCCAAGAAATTGCCCATGACACACGGATACCTCTTGTTTCATTTACCGGAAGTTCGAAGGTTGGCCTAATGGTTCAGCAGACTGTTAGCGAAAGATTTGGAAAATGTTTACTTGAACTTAGTGGTAACAATGCGATCATTGTAATGAGTGATGCTGACATACGACTTGCTGTTCGCTCGGTTTTGTTTGCTGCTGTCGGCACTGCTGGACAACGCTGCACAACTTGCAGGAGGCTGCTGCTTCATGAAAGCATATACCAAGACTTTCTAGATCAACTGATTGATGTATATAGACAAGTTAAAATAGGGGACCCATTGGATAAGGGTACAATATTAGGACCACTGCACACTCCTACTTCCAAGGAGAGCTTTGTAAAAGGCATCGATGTCATAAAATCTCAGGGAGGAAAAATTCTTGTTGGAGGATGTGGCATAGAATCCAAAGGAAACTTTGTGCAACCTACCATAGTAGAGATATCTGCTGATGCAGAAGTTGTCAAGGAAGAATTATTTGGTCCTGTCCTTTATGTTATTAAATTCAAGACTTTTGAAGAAGCAATAGAAATAAATAATTCAGTGCCGCAAGGCCTAAGTAGTTCCATATTCACACAGAGGCCAGATGTTCTCTTCAAATGGATTGGGCCGCTTGGTAGTGATTGTGGCATCGTAAATGTCAACATACCGACTAATGGTGCTGAAATTGGTGGTGCTTTTGGTGGAGAAAAGGCCACTGGTGGTGGTCGAGAAGCAGGAAGTGACTCGTGGAAGCAATACATGCGACGTTCTACATGCACCATCAACTATGGAAGTGAGCTGCCACTTGCTCAGGGAATCAATTTCGGCTAGTTTTCTTACAGTCATCTTCAGCAGCATGCTGGAAGGAATCACATAGTTTTGGCTGCTCATAGCATGGATCACCTTATGCAATGCATGTGATTTTTTTTGTGAACATTTTGTTGGCCAATTATGATATGTTTGACATTCAGCATTGTGAACTTTTGTATCAATGAGATAATAATTTCTGAGCATCAATTACTAAGCTACAATATCATTGTCTTAATATTGATCTTTTGTGTTTCTCTATCATTTCGAACACTTGTTTTGAGTTCCTTTTTAGTTTTTCTGACAATGATTGAGCTGTAAAACATGCAAATTTTTTTTGCACAAATACAGTATAATAAGCATTGTAAAAAGAAGGGCAAAATGCTTGCCG

Network for GWHGAAEX016512

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00171.21	Aldedh	35	489	1.30E-131

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14085	ALDH7A1	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Biosynthesis of antibiotics	map01130
		Glycolysis / Gluconeogenesis	map00010
		Ascorbate and aldarate metabolism	map00053
		Pyruvate metabolism	map00620
		Fatty acid degradation	map00071
		Glycerolipid metabolism	map00561
		Pyrimidine metabolism	map00240
		Cysteine and methionine metabolism	map00270
		Lysine degradation	map00310
		Arginine and proline metabolism	map00330
		Histidine metabolism	map00340
		Tryptophan metabolism	map00380
		beta-Alanine metabolism	map00410

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0016491	Molecular Function	oxidoreductase activity
GO:0016620	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	122.920
SRP064423	SRR2545915	Juvenile tuber	127.220
SRP108465	SRR5643513	five period of Gastrodia elata	87.200
	SRR5643514	five period of Gastrodia elata	102.790
	SRR5643515	five period of Gastrodia elata	88.070
	SRR5643524	five period of Gastrodia elata	98.290
	SRR5643525	five period of Gastrodia elata	105.720
	SRR5643528	five period of Gastrodia elata	104.050
	SRR5643658	five period of Gastrodia elata	124.790
	SRR5643659	five period of Gastrodia elata	76.380
	SRR5643660	five period of Gastrodia elata	74.120
	SRR5643661	five period of Gastrodia elata	76.650
	SRR5643662	five period of Gastrodia elata	67.140
	SRR5643663	five period of Gastrodia elata	81.100
	SRR5643664	five period of Gastrodia elata	79.340
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	118.810
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	84.940
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	114.220
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	131.190
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	155.530
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	167.040
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	138.110
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	144.290
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	122.240
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	128.350
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	121.110
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	121.110
SRP279888	Gastro	Gastrodia elata tuber	115.43
	Juven	Juvenile tuber	120.09
	Mother_Gastro	Mother tuber of Gastrodia elata	88.67
	Mother_Juven	Mother tuber of Juvenile	94.46