Detail information of GWHGAAEX016518/evm.TU.scaffold_77.29


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743854503|ref|XP_010940914.1|1.38E-11PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like isoform X1 [Elaeis guineensis]
Swissprottr|P46279|RPB7_SOYBN7.00E-11DNA-directed RNA polymerase II subunit RPB7
trEMBLtr|M0RX03|M0RX03_MUSAM6.00E-11Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P04450_001}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007510935151094564+
Transcript Sequence

Network for GWHGAAEX016518

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K03015RPB7, POLR2G RNA polymerase map03020

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.250
SRR2545915Juvenile tuber0.280
SRP108465SRR5643513five period of Gastrodia elata0.300
SRR5643514five period of Gastrodia elata0.450
SRR5643515five period of Gastrodia elata0.270
SRR5643524five period of Gastrodia elata1.190
SRR5643525five period of Gastrodia elata0.670
SRR5643528five period of Gastrodia elata0.300
SRR5643658five period of Gastrodia elata0.910
SRR5643659five period of Gastrodia elata1.190
SRR5643660five period of Gastrodia elata0.530
SRR5643661five period of Gastrodia elata0.530
SRR5643662five period of Gastrodia elata1.080
SRR5643663five period of Gastrodia elata0.600
SRR5643664five period of Gastrodia elata0.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.970
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.820
SRR6049657Rhizomagastrodiae_C368-T07_good_11.950
SRR6049658Rhizomagastrodiae_C368-T04_good_11.780
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.530
SRR6049661Rhizomagastrodiae_C368-T04_good_10.970
SRR6049662Rhizomagastrodiae_C368-T01_good_11.220
SRR6049663Rhizomagastrodiae_C368-T01_good_11.670
SRR6049664Rhizomagastrodiae_C368-T10_good_10.670
SRR6049665Rhizomagastrodiae_C368-T10_good_10.670
SRP279888GastroGastrodia elata tuber 3.63
JuvenJuvenile tuber3.91
Mother_GastroMother tuber of Gastrodia elata 3.51
Mother_JuvenMother tuber of Juvenile 2.54