Detail information of GWHGAAEX016519/evm.TU.scaffold_77.30_evm.TU.scaffold_77.31
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|488776494|ref|YP_007945910.1| | 3.00E-24 | protein kinase family protein with PASTA domain [Desulfotomaculum gibsoniae DSM 7213] |
| nr | gi|672116907|ref|XP_008781626.1| | 0 | PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Phoenix dactylifera] |
| Swissprot | tr|Q9SX31|PERK9_ARATH | 4.00E-68 | Proline-rich receptor-like protein kinase PERK9 |
| trEMBL | tr|M5XLP6|M5XLP6_PRUPE | 0 | Uncharacterized protein {ECO:0000313|EMBL:EMJ26436.1} |
| TAIR | AT1G77280 | 0 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000075 | 1186682 | 1191646 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016519
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module5 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 391 | 593 | 1.80E-40 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VI |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 4.840 |
| SRR2545915 | Juvenile tuber | 4.280 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 17.370 |
| SRR5643514 | five period of Gastrodia elata | 32.390 | |
| SRR5643515 | five period of Gastrodia elata | 18.380 | |
| SRR5643524 | five period of Gastrodia elata | 31.090 | |
| SRR5643525 | five period of Gastrodia elata | 5.040 | |
| SRR5643528 | five period of Gastrodia elata | 4.580 | |
| SRR5643658 | five period of Gastrodia elata | 3.960 | |
| SRR5643659 | five period of Gastrodia elata | 2.540 | |
| SRR5643660 | five period of Gastrodia elata | 1.540 | |
| SRR5643661 | five period of Gastrodia elata | 2.380 | |
| SRR5643662 | five period of Gastrodia elata | 4.920 | |
| SRR5643663 | five period of Gastrodia elata | 6.140 | |
| SRR5643664 | five period of Gastrodia elata | 4.730 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 16.320 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 16.070 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 16.350 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 10.850 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 13.570 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 11.380 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 11.420 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 11.140 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 16.000 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 13.490 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 25.030 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 25.030 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 5.54 |
| Juven | Juvenile tuber | 2.94 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 8.71 | |
| Mother_Juven | Mother tuber of Juvenile | 4.26 |