Gene detail

Detail information of GWHGAAEX016520/evm.TU.scaffold_77.32

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1339	4.00E-135	Aspartyl protease
nr	gi\|115487628\|ref\|NP_001066301.1\|	2.45E-164	Os12g0177500 [Oryza sativa Japonica Group]
Swissprot	tr\|Q0IU52\|ASP1_ORYSJ	1.00E-108	Aspartic proteinase Asp1 (Precursor)
trEMBL	tr\|Q2QWY7\|Q2QWY7_ORYSJ	9.00E-165	cDNA clone:J013000A17, full insert sequence {ECO:0000313\|EMBL:BAG89196.1}
TAIR	AT4G33490	4.00E-135	Eukaryotic aspartyl protease family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000075	1201196	1204390	+

Transcript Sequence
>GWHTAAEX016520 GTAAGGGACGACTTTATCTTACATCAAAAGCTATAAATAGCACTTTAGAAAGGGGACAAAACCAGAGAGCATTCTCGAAACCTGTCCGTTTCGCCGACACCTAGAGAATGAAGCGGCGAAATGCGTCAATCCTGCAACTTGTCGCAATGGTTGCAATCCTCACAGCCACGTTCCTCTCCGTACTTCCCTCCCATTCTGCTGCTATCACTGTCTCCCAGTTCAGCCCTCCCCCCCAGAATCCTAACTTCTGGTTCCATCGCGATCCGTCTCCGCCCGATTCTATCTCGCCGGTGCCCCCCTCCATCGTTGCTTCCGGCCGTCGTGTGCCACCCTCCTCCGCCATCTTTCCCGTCTACGGCAACGTTTATCCCAACGGATTCTACTACGTTTCAATGAACATCGGAGATCCGCCGAAACCCTACTTCCTCGATATTGACACCGGGAGCGACGTCACCTGGCTCCAATGCGACGCCCCCTGCATTAGATGCTCGCAGGGCCCGCATCCTCTGTACCGGCCATCGAAGAACCGATTGGTGCCGTGCGAGGAACCTCTCTGCGCAGCATTGCACGAATCGACGAATCATGAGAGCAGGTGCGAGATTCCCGAACAATGCGACTATGAGATCGAGTACCAAGATCAGGGATCCTCAATAGGAGTTCTGGTGACCGATGCATTCGCGCTCCGATTGACGAACCGCTCCGTCGCTTACCCCTCCCTAGCCTTTGGGTGCGGATACGACCAGCAATCTGGGCCGTCGGCGGGGCCAATCGGGCGGTCGGCGACTGACGGCGTGTTAGGACTCGGGAACGGGAAAATCAGCATCGTCTCGCAGCTGAGCGAAATGGGGGTATGCCGGAGCGTCGTTGGCCATTGCCTGAGCAGGCAGCGCGCGGGTTTTCTGTTCTTCGGGGAAGATGTCGTTCCTCCCAAGAGCCTGACTTGGGCGCCGATGTCACGCGATTCTTCTCTGAAATATTACTCACCGGGCGTGACTGCAGTGTATGCGGGAAAGCAGCGGCTGGGGGTGAAGCAAGCTTTGGTGTTTGATAGTGGGAGCTCTTACACCTACTTCAACGACCAGCTCTATCATTCCCTGCTCTCGGCGGTGAGCATGGATGTGTTGAACTCAAAGATGCGGCTGAAAGAGGCGGCGGAAGAGAAGGCGCTGCCTCGGTGTTGGAAAGGCACGCGGCCAATCAAGTCAGTCTTTGAGCTTCGGAAGTACTTTCGACCGTTGATCCTCAGCTTCATCGGCGACGGTAAAGCGCCGCCTGCTCTGATGGAGATCCCAGCTGAGAATTACTTCATTGTCACGAGACAAGGCAACGCTTGCTTGGGCATCCTCAACGGTGGCGAAATAGGTCTGGGCGATTTGAACGTTGTTGGAGATATATCAATGCAAGACGTGACGATTGTTTATGACAATGAGAGACAAAGGATCGGATGGTCTCGAGTAGCTGGCTGCGGCAGGCTTCCCAAGTTTGTCAGCACTGCTCTCTGATTCATGGATGCATGCCTTCAATGTATGCCCATTCCTTCAAACACTATACATAACTAATAGCGGGTAACAGCTGCCCATTATATGTACATTTACAAGTAAAATAGAGGTAATCCTGTGTAGATAATATTGCTATGTCACAGACTCGAAATTAATTCTTACATAAGCATAAAGTTCTACTGGAAGTGCATATTCTCTTACTTTTTTGTCCTTGCTCATCTCCATCATGAGAATGTATATTCTTAGATTTCCA

Network for GWHGAAEX016520

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module3

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14543.5	TAXi_N	92	268	1.50E-50
PF14541.5	TAXi_C	307	448	2.20E-12

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004190	Molecular Function	aspartic-type endopeptidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.040
SRP064423	SRR2545915	Juvenile tuber	12.830
SRP108465	SRR5643513	five period of Gastrodia elata	4.440
	SRR5643514	five period of Gastrodia elata	4.440
	SRR5643515	five period of Gastrodia elata	6.400
	SRR5643524	five period of Gastrodia elata	4.860
	SRR5643525	five period of Gastrodia elata	6.300
	SRR5643528	five period of Gastrodia elata	4.940
	SRR5643658	five period of Gastrodia elata	3.720
	SRR5643659	five period of Gastrodia elata	12.740
	SRR5643660	five period of Gastrodia elata	12.510
	SRR5643661	five period of Gastrodia elata	17.150
	SRR5643662	five period of Gastrodia elata	12.620
	SRR5643663	five period of Gastrodia elata	20.750
	SRR5643664	five period of Gastrodia elata	14.150
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.350
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.050
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.370
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.020
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.400
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.210
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.790
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.700
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.530
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.990
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.960
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.960
SRP279888	Gastro	Gastrodia elata tuber	13.10
	Juven	Juvenile tuber	3.50
	Mother_Gastro	Mother tuber of Gastrodia elata	2.96
	Mother_Juven	Mother tuber of Juvenile	1.39