Gene detail

Detail information of GWHGAAEX016521/evm.TU.scaffold_77.34

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0242	0	Kinesin-like protein
nr	gi\|743816757\|ref\|XP_010930729.1\|	0	PREDICTED: kinesin heavy chain isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q8S950\|NACK1_TOBAC	1.00E-79	Kinesin-like protein NACK1
trEMBL	tr\|A0A067K9E0\|A0A067K9E0_JATCU	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT1G21730	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000075	1221319	1373232	-

Transcript Sequence
>GWHTAAEX016521 ACTTTCGGTCAACAAACCGCAGGTGAGCGCACTTCTTGATCCTTCCATTTTCCCCAGGAAGCTTTAAGGTACTGAACGCTGCAGGGTGTTCATGTGCCGGTGACTAGGCGACTCCTCTCTGACATCGTCCGGCCGAAACCCTTCGCCAGAGGGGCGGATAAACTTTATAAATCTACGAAAGCCCTTTGATGTCTTCCCGGAAGCAGAGGACGAGCGTCTCACCCTCCCGGTCACGGAAGACGTTCATGGCACCTGGCACAAAACCTGGAGCTCGCCCTGTGACCCCGTCTAATGGCAGCGGCAGACAGACAACGCCGCTGTATTCTTCTGTTAGCCGGCCGACGACGCCTTCGTCATCAGTGTCTTCAGTTGCTCGGGCGCGGAGCCCGAATACCTCTAGGATATCGCCCGTGCCCAGTACCACGGCTTCGTCCTCGTATCAGGTCTCCGATCGGCCTGAATTTTACGAAGCAACGGAGAATGTCATTGTCACAGTCCGATTCCGGCCTCTCAGCGCACGAGAGATTAGCAAAGGGGATGAGATAGCGTGGTATGCCGATGGAGACTCTCGTGTTTGCAACGAGTATAATCCCAACATTACGTTTGGCTTTGATAGAGTGTTTGGTCCAGTAACAACTACTCGCCATGTTTATGATGTGGCTGCGCAGCATGTTGTAAGTGGTGCTATGCAAGGAATTAATGGTACAGTTTTTGCTTATGGTGTTACTAGTAGTGGAAAGACTCATACCATGCATGGAGAGCAAAAGTCACCCGGAATCATACCATTGGCTGTAAAGGATGTATTCAGGATCATTCAAGAGACACCTGGAAGAGAGTTTCTTCTTCGAGTTTCTTATCTTGAAATCTATAATGAGGTTATAAATGACTTGCTTGACCCAGCAGGACAGAACCTTAGAATAAGAGAAGATTCGCAGGGAACATACGTGGAGGGAATCAAAGAAGAAGTCGTTTTGTCTCCTGCCCATGCACTCTCATTAATAGCTTCTGGCGAAGAGCACCGACATGTGGGTTCTACTAACTTTAATTTACTCAGTAGTCGAAGCCATACTATTTTCACATTGATAATTGAAAGCAGTCATTCTGATGAAAATCATGGGGATGATGATGTTACACTATCTCAACTGAATTTGATTGACCTTGCTGGTTCAGAAAGTTCAAAGGCTGAAACCACTGGCTTGCGACGCAAAGAAGGTTCATACATAAATAAAAGTCTACTTACACTTGGGACTGTGATTTCTAAATTAACTGATGATAAGGCCATGCACATTCCTTATAGAGATTCAAAGCTCACACGCTTGCTGCAGTCTTCTCTCAGTGGACATGGAAGAGTATCTCTTATCTGCACTGTAACTCCGGCTTCTAGCAATAGCGAAGAGACTCATAATACCTTGAAGTTTGCTGATCGAAGCAAGCATGTGGAGATTAAAGCTTCTCAAAATAAGATAATTGATGAAAAGTCTTTAATAAAGAAATATCAGAGAGAGATCTCTTTCTTGAAAGAAGAATTGCAACAGTTAAAACGTGGCCTGATGGAGAAAAGCTTTTCTTATGATCAAGAAAACATTGCGAACCTTAAACTTCAGATGGAAGCTGGCCAAGTGAAGTTGCTATCAAGGCTTGAAGAGGAAGAGCAAGCAAAAGCTGCTTTACTGGGTAGGATTCAACGATTAACTAAGTTGATACTAGTGTCTACAAAGAATTCGTTGCCTTCTAAAGTTACCGACAAGAGCTTGCACAGGCGTAGGCATTCTTTTGGGGAGGATGAGCTGTCTTATTTGCCCGAACGAAAACGAGAATACATCGTTGATGATGGTGATGAAAGTGTTGGTTTAGAGTTAACAAGGGATGGTCGACTTGGAATTAATGGTGTATGCGAGCCTCTAAAATTTGATAGAAAGAATCGGAAGCGAGGGATGCTTGGTTGGTTCAAAGTGAAGAAACCTGAGCACATTACTGAATTACCTGTTAATGCTGATCACGAAAGTTCAGCCAAAATGAATTTCTCTAGCATGACTGAAGTACAAAGAAATTACGTTAGCAGAAAGGGTGATGGTATTTCCTGGTGTGCTGATTATATTACTGAAAACACCCAAGCAGGAGATCTATTCAGTGAAACAGCTAAAGGATGCCAGCCTTCCTCGACAGGTTCAACTATTATGGATGAAATGGATCTTGTCAGCGAGCAGGTCAAGACGCTAGCTGGAGAAGTGGCACTTTGCACCAGTTCCTTGAAAAGATTTGCGGAGCAAGCTTCTATTAATCCTGACGATTCAAATATTCAGGTGCAAATGAAAAAATTGAGGGAAGAAATTAATGGGAAGAAGCTGCAGATGCGTGCTCTTGAACAGAGAATGATTGTTTCCCTTGATGCTGCTCCACATTTATCAAATATTAAAATATCACAGACTCTTTCAAAGCTGACCAGTCAGTTGAGTGAGAAGGCATTTGAGCTCGAGATTATGTCTGCTGATAATCGAATTCTTCAAGACCAGCTGCAAATGAAGATATCTGAAAATGACAATCTTCAGGATACTATTAAATCGCTAAAGGAGCAGCTCAATCATTTTATGGATAAAATCAATGAAAATAGTTACTGCATCTGTAAGAACAAGATGGTCATACCTTCATTTGAAGATGAGCCTGAAGGGATATCCTTGTTAGTGGAATCTTCTTCCTTGGAACTTAATTCAATATCAACAAATAAAGAATTCAAGGAAAGTTGCAGTGAGCAGTCGCTAAGGTCCCAGGTTCTAAAGCAGGCTGCTGAGATTGAAAATCTGAAGCAAAAAAGTTTGCAATTAGCTGAAGAAAAGGATGGTCTTCAAATTCATTGTCAAGAGCTAACTGAGGAAGCTTCTTATGCCCGAGAACTGGCTGGAGCTGCAGCAGTTGAGCTTCGAAACTTAGCAGAAGAGGTGACGAAACTTTCAAGTGAGAATGCAAAATTGACAGATGATTTAACTGCCTCATTAGAATCTACTACTACTGGAATCAATAATTTCCAAGGGCAGGTCCTTTTTGATGGGAAGGATGCTAATGATTATTTATGGAGGTCAGATGAAAGTGTTTTAGTTGATGAGTTGAGAAAGGAGCTACTAAGAAAATGTGAGAGAGAATCTTCTCTCGAGACTGCATTATCTGTCAGAGATCAAATGGTGTTTAAACTGCAAAAAACTGTCGATAAATCTAAACAATGCAAGCAAGATTTAGAAAATAAACTTGCAAGCATGTGCTTATTTGCTGCTAAGCTTAAGAAAAGTGGTGTGATTTCTGATGAATCTTTTTTTGACGGTTTTGGTGAACAAGAATTTCATCCATTAAGAAAAATCTCATTGGTAACAAATGGTGATTCTGTAAGGCTTAAGGGGGAAATTCTCTCTAATTATTTGCATGATGATCAAGTAGCTAGCTTTGAGGATTTAAGGTCTGCTTTGGAACATGAAAGAAGGCGGTGCAAAGAGCTCGAAGGCATCATTTCTACATTGAAGGAGTATAAAAAGGTCACCCGAAGAAGTGCAACAGGACTTTATTGTCATATTATTAGCACCACTAGGCTGGAATTAAGGCTGAAGATATTAGCGGCGTTGATATCAAAGCTCTTGAAGAAATGCAAAATTTTCATGTCGAAGCCTTATCAAAAATATGCCAAGAAAAGCTGATATGCCAAACTGCTGCATCAAGGAGATAAAAGTGCCAAGCTACCAATGATTCAAAATATTTTTTCTTAATTTACGTTGCCACAGGCAAACCCTGGCGAGGCTTCTTCACTGCTTTGCGGAGGGAGGTCCATACACTGATTAGAGTCTGTCTCGTGTTTATGTTTTGTACCACTGATTAGAGACAGAAGAGCATTGTTTTTATATATTATATTTGTAAAGAGTGAATGGCACCTAAAATTCATCATGTTCTCAAGGTATAAGCTCTGTTTGATGCTGTTGTGATTCTCTAAAGAAGCTAAGGAAGCTGTTTTTATTATTTGGATGTTCAGTTGTCATACAACTTGTACAGAACATTTGCAGTGAACTGACTTTGGGAGCTAAGATAATACTTTTCATATGTTAAATATCAAAGAGCATACTTTGAGACTCTTTTGATGGGGGCTTCTTTTTGAGATTTCTGATAAAATAACCGTTGCCAAATAATAATAGACATCAAATAAAGTTGTCCCAAATGCTGCCATAATCATT

Network for GWHGAAEX016521

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	104	417	2.30E-104

Protein Sequence

>GWHPAAEX016521
MSSRKQRTSVSPSRSRKTFMAPGTKPGARPVTPSNGSGRQTTPLYSSVSRPTTPSSSVSSVARARSPNTSRISPVPSTTASSSYQVSDRPEFYEATENVIVTVRFRPLSAREISKGDEIAWYADGDSRVCNEYNPNITFGFDRVFGPVTTTRHVYDVAAQHVVSGAMQGINGTVFAYGVTSSGKTHTMHGEQKSPGIIPLAVKDVFRIIQETPGREFLLRVSYLEIYNEVINDLLDPAGQNLRIREDSQGTYVEGIKEEVVLSPAHALSLIASGEEHRHVGSTNFNLLSSRSHTIFTLIIESSHSDENHGDDDVTLSQLNLIDLAGSESSKAETTGLRRKEGSYINKSLLTLGTVISKLTDDKAMHIPYRDSKLTRLLQSSLSGHGRVSLICTVTPASSNSEETHNTLKFADRSKHVEIKASQNKIIDEKSLIKKYQREISFLKEELQQLKRGLMEKSFSYDQENIANLKLQMEAGQVKLLSRLEEEEQAKAALLGRIQRLTKLILVSTKNSLPSKVTDKSLHRRRHSFGEDELSYLPERKREYIVDDGDESVGLELTRDGRLGINGVCEPLKFDRKNRKRGMLGWFKVKKPEHITELPVNADHESSAKMNFSSMTEVQRNYVSRKGDGISWCADYITENTQAGDLFSETAKGCQPSSTGSTIMDEMDLVSEQVKTLAGEVALCTSSLKRFAEQASINPDDSNIQVQMKKLREEINGKKLQMRALEQRMIVSLDAAPHLSNIKISQTLSKLTSQLSEKAFELEIMSADNRILQDQLQMKISENDNLQDTIKSLKEQLNHFMDKINENSYCICKNKMVIPSFEDEPEGISLLVESSSLELNSISTNKEFKESCSEQSLRSQVLKQAAEIENLKQKSLQLAEEKDGLQIHCQELTEEASYARELAGAAAVELRNLAEEVTKLSSENAKLTDDLTASLESTTTGINNFQGQVLFDGKDANDYLWRSDESVLVDELRKELLRKCERESSLETALSVRDQMVFKLQKTVDKSKQCKQDLENKLASMCLFAAKLKKSGVISDESFFDGFGEQEFHPLRKISLVTNGDSVRLKGEILSNYLHDDQVASFEDLRSALEHERRRCKELEGIISTLKEYKKVTRRSATGLYCHIISTTRLELRLKILAALISKLLKKCKIFMSKPYQKYAKKS

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0005524	Molecular Function	ATP binding
GO:0003777	Molecular Function	microtubule motor activity
GO:0008017	Molecular Function	microtubule binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	50.800
SRP064423	SRR2545915	Juvenile tuber	50.670
SRP108465	SRR5643513	five period of Gastrodia elata	14.230
	SRR5643514	five period of Gastrodia elata	11.960
	SRR5643515	five period of Gastrodia elata	12.210
	SRR5643524	five period of Gastrodia elata	11.250
	SRR5643525	five period of Gastrodia elata	17.000
	SRR5643528	five period of Gastrodia elata	10.120
	SRR5643658	five period of Gastrodia elata	19.280
	SRR5643659	five period of Gastrodia elata	30.340
	SRR5643660	five period of Gastrodia elata	33.250
	SRR5643661	five period of Gastrodia elata	23.540
	SRR5643662	five period of Gastrodia elata	29.570
	SRR5643663	five period of Gastrodia elata	34.970
	SRR5643664	five period of Gastrodia elata	40.300
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	28.320
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	18.830
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	22.010
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	30.090
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	27.010
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	29.950
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	25.430
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	24.030
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	15.470
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	19.090
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	17.340
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	17.340
SRP279888	Gastro	Gastrodia elata tuber	28.08
	Juven	Juvenile tuber	24.34
	Mother_Gastro	Mother tuber of Gastrodia elata	8.12
	Mother_Juven	Mother tuber of Juvenile	14.73