Gene detail

Detail information of GWHGAAEX016522/evm.TU.scaffold_77.36

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|427720026\|ref\|YP_007068020.1\|	2.00E-151	aldehyde dehydrogenase [Calothrix sp. PCC 7507]
KOG	KOG2456	0	Aldehyde dehydrogenase
nr	gi\|695072785\|ref\|XP_009383529.1\|	0	PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q70DU8\|AL3H1_ARATH	0	Aldehyde dehydrogenase family 3 member H1
trEMBL	tr\|M0RRG7\|M0RRG7_MUSAM	0	Aldehyde dehydrogenase {ECO:0000256\|PIRNR:PIRNR036492}
TAIR	AT1G44170	0	aldehyde dehydrogenase 3H1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000075	1448516	1492581	+

Transcript Sequence
>GWHTAAEX016522 CGTCACTTCACCAACCTATAAGTCTCCATCCACCCACTGCGCCTGATTGAAAGTTCCCTGTTCTCTGAAACCACTTGAGTGCTGTCCTCTGCTCTTCTCTTTCACTCCCCTATTATTGAGTGGATTTCAATCTCCAGTATTGTTGCACGGGGGATTAGATGGGCGACCAAAGTCATCGGCCAGATTGCTCGCAGAAACCAGAGGAAATGGTGAAAGGACTGCGGCAGAGCTTCACCTCTGGGAAGACGAGAGGCTACGAGTGGAGAGAAGCTCAGTTGAAGGGTATTAAAAGGATGATCGACGAGAAGGAGGTAGACATCATGGAGGCGCTCCAAGCCGATCTGTCCAAGCCAAAGCTTGAATCATTTGTCCACGAGATTTCATTGGCGAAGGCTTCATGTGAATTAGCTTTAAAGGAATTGAAGCGGTGGATGAAACCTATGAAGGTTTCAAGCATGCTAACAGCCTTTCCCTCATCGGCCAAGATTGTACCAGAACCGTTGGGTGTTGTGCTTGTTATTTCAGCTTGGAATTATCCCTTTTTGCTATCTATTGATCCAGTCATAGGAGCTATTGCAGCAGGAAATGCTGTTGTTCTAAAGCCATCAGAAATTGCTCCAGCTACATCAGCTTTGCTTGCTAGTTTATTACCAAATTTTGTTGACAATTCTTGCATTAAAGTAGTTGAGGGAGCTATTGATGAAACTACTGCACTTTTAGAGCAGAAGTTTGATAAAATACTGTATACAGGAAATGCAAAAATCGGACGGATTATTATGGCTGCAGCTGCAAAACATTTAACACCTGTAGTTCTGGAACTTGGTGGAAAATGTCCTGTTGTTGTGGATTCCGATGTTAACCTAAAAGTTGCAGCAAAAAGGATTTCTGTAGGAAAGTGGGGATCCAATAATGGGCAAGCTTGTCTGGCTCCAGATTACATAATAACAACAAAACTATTTGCTCCGAAATTGGCGGATGCCCTAAAAATTTCTATTGAGAAATTTTATGGGGATAATCCTTTTCAGTCTGGAGACCTATCTCGTGTAGTGAATTCTAATCATTTTGCACGCATATGCAAACTCTTAGATGATGAGAAACTTTCAGGAAAGTTTATTCATGGTGGGGAGAAGGATAAGAAGCTTCTAAAGATCTCTCCAACTCTCTTGTTAGATGTTCCAGATGATTCATTAGTAATGCAGGAGGAGATCTTTGGCCCTTTGCTTCCTATCGTCACAGTTAACAATTTGGAGGAGTGTTTTGATTTGATAAATTCAAAGCCAAAACCTCTCGCTGCTTATCTCTTCACCCAGAACAAGAAATTTGAGGAAAAGTTTGTGAAAACTGTTTCCGCTGGTGGAATTCTCGTCAATGACATAGCCATGCATTTTGCAAACCCTAATTTACCATTTGGTGGAGTAGGAGAGAGTGGAATGGGTTCATATCATGGAAAATTTTCTTTTGATGCCTTCAGTCATAATAAGGCAGTTCTTCAGAGGAGCTTTGTTGGAGAAGTATCTGCTAGATACCCACCATATACATCCCAAAAACAGAAGTTTTTGAGGGCGCTTCTTAGTGGCAACATTATTGGCTTGATTCTAGCCATCTTTGGATGGCCTAGGTCTTGATTTGAAATTGAATGATTGTTTATTATGTATTTTTATTCAAATTTCGACAAATATAGAAGAGCCTATACATTGTAACTCTATGAACATTACAGAAAAATGTATGATAAATTAATTGGTGTGAATGTTGTTTTATAGATTTTGTTGATTTTTGTTTGTTGTACTGCAATTGTTTTGTGAACAATATTAGTGATGTATATTGTTTGATAATATGCTGTTATGACTAGATTTTACTCTTCTT

Network for GWHGAAEX016522

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00171.21	Aldedh	18	443	3.20E-81

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00128	ALDH	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Biosynthesis of antibiotics	map01130
		Glycolysis / Gluconeogenesis	map00010
		Ascorbate and aldarate metabolism	map00053
		Pyruvate metabolism	map00620
		Fatty acid degradation	map00071
		Glycerolipid metabolism	map00561
		Cysteine and methionine metabolism	map00270
		Lysine degradation	map00310
		Arginine and proline metabolism	map00330
		Histidine metabolism	map00340
		Tryptophan metabolism	map00380
		beta-Alanine metabolism	map00410
		Insect hormone biosynthesis	map00981
		Limonene and pinene degradation	map00903
		Chloroalkane and chloroalkene degradation	map00625

Gene Ontology

GO term	Ontology	Name
GO:0006081	Biological Process	cellular aldehyde metabolic process
GO:0055114	Biological Process	oxidation-reduction process
GO:0016620	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016491	Molecular Function	oxidoreductase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	72.270
SRP064423	SRR2545915	Juvenile tuber	105.530
SRP108465	SRR5643513	five period of Gastrodia elata	55.780
	SRR5643514	five period of Gastrodia elata	81.000
	SRR5643515	five period of Gastrodia elata	73.970
	SRR5643524	five period of Gastrodia elata	79.900
	SRR5643525	five period of Gastrodia elata	225.180
	SRR5643528	five period of Gastrodia elata	220.830
	SRR5643658	five period of Gastrodia elata	334.200
	SRR5643659	five period of Gastrodia elata	76.970
	SRR5643660	five period of Gastrodia elata	72.520
	SRR5643661	five period of Gastrodia elata	62.470
	SRR5643662	five period of Gastrodia elata	74.780
	SRR5643663	five period of Gastrodia elata	82.730
	SRR5643664	five period of Gastrodia elata	85.250
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	61.310
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	52.960
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	68.550
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	56.900
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	75.700
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	82.920
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	59.080
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	71.650
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	79.720
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	81.960
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	73.230
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	73.230
SRP279888	Gastro	Gastrodia elata tuber	83.02
	Juven	Juvenile tuber	67.96
	Mother_Gastro	Mother tuber of Gastrodia elata	135.04
	Mother_Juven	Mother tuber of Juvenile	98.88