Detail information of GWHGAAEX016542/evm.TU.scaffold_77.63


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720016452|ref|XP_010261159.1|4.20E-170PREDICTED: uncharacterized protein LOC104600052 [Nelumbo nucifera]
trEMBLtr|A0A061FFL2|A0A061FFL2_THECC3.00E-168DNA-directed RNA polymerase II protein isoform 1 {ECO:0000313|EMBL:EOY16120.1}
TAIRAT4G085402.00E-121DNA-directed RNA polymerase II protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007525513962573210-
Transcript Sequence

Network for GWHGAAEX016542

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10186.8Atg1483622.90E-52
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.650
SRR2545915Juvenile tuber24.470
SRP108465SRR5643513five period of Gastrodia elata20.640
SRR5643514five period of Gastrodia elata21.720
SRR5643515five period of Gastrodia elata19.970
SRR5643524five period of Gastrodia elata22.230
SRR5643525five period of Gastrodia elata27.550
SRR5643528five period of Gastrodia elata33.400
SRR5643658five period of Gastrodia elata32.430
SRR5643659five period of Gastrodia elata15.410
SRR5643660five period of Gastrodia elata14.420
SRR5643661five period of Gastrodia elata16.530
SRR5643662five period of Gastrodia elata13.670
SRR5643663five period of Gastrodia elata15.220
SRR5643664five period of Gastrodia elata14.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.910
SRR6049655Rhizomagastrodiae_C368-T10_good_123.480
SRR6049656Rhizomagastrodiae_C368-T07_good_122.360
SRR6049657Rhizomagastrodiae_C368-T07_good_121.020
SRR6049658Rhizomagastrodiae_C368-T04_good_120.870
SRR6049659Rhizomagastrodiae_C368-T04_good_123.950
SRR6049660Rhizomagastrodiae_C368-T01_good_122.350
SRR6049661Rhizomagastrodiae_C368-T04_good_121.960
SRR6049662Rhizomagastrodiae_C368-T01_good_120.250
SRR6049663Rhizomagastrodiae_C368-T01_good_121.810
SRR6049664Rhizomagastrodiae_C368-T10_good_122.080
SRR6049665Rhizomagastrodiae_C368-T10_good_122.080
SRP279888GastroGastrodia elata tuber 21.67
JuvenJuvenile tuber23.09
Mother_GastroMother tuber of Gastrodia elata 65.01
Mother_JuvenMother tuber of Juvenile 41.18