Detail information of GWHGAAEX016550/evm.TU.scaffold_77.75


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262198376|ref|YP_003269585.1|1.00E-68trehalose-phosphatase [Haliangium ochraceum DSM 14365]
KOGKOG10505.00E-136Trehalose-6-phosphate synthase component TPS1 and related subunits
nrgi|672117872|ref|XP_008782128.1|1.33E-156PREDICTED: probable trehalose-phosphate phosphatase 6 [Phoenix dactylifera]
Swissprottr|Q6ZAL2|TPP6_ORYSJ3.00E-147Probable trehalose-phosphate phosphatase 6
trEMBLtr|F6I7F4|F6I7F4_VITVI7.00E-154Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117} (Fragment)
TAIRAT5G651405.00E-136Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007529213092923781+
Transcript Sequence

Network for GWHGAAEX016550

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02358.15Trehalose_PPase803176.00E-70
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01087otsB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005992Biological Processtrehalose biosynthetic process
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.690
SRR2545915Juvenile tuber0.260
SRP108465SRR5643513five period of Gastrodia elata8.070
SRR5643514five period of Gastrodia elata7.530
SRR5643515five period of Gastrodia elata4.130
SRR5643524five period of Gastrodia elata7.280
SRR5643525five period of Gastrodia elata0.710
SRR5643528five period of Gastrodia elata0.240
SRR5643658five period of Gastrodia elata0.230
SRR5643659five period of Gastrodia elata10.010
SRR5643660five period of Gastrodia elata4.370
SRR5643661five period of Gastrodia elata10.830
SRR5643662five period of Gastrodia elata6.100
SRR5643663five period of Gastrodia elata4.090
SRR5643664five period of Gastrodia elata6.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.150
SRR6049655Rhizomagastrodiae_C368-T10_good_17.860
SRR6049656Rhizomagastrodiae_C368-T07_good_19.740
SRR6049657Rhizomagastrodiae_C368-T07_good_15.640
SRR6049658Rhizomagastrodiae_C368-T04_good_111.550
SRR6049659Rhizomagastrodiae_C368-T04_good_15.600
SRR6049660Rhizomagastrodiae_C368-T01_good_16.590
SRR6049661Rhizomagastrodiae_C368-T04_good_16.510
SRR6049662Rhizomagastrodiae_C368-T01_good_18.250
SRR6049663Rhizomagastrodiae_C368-T01_good_17.520
SRR6049664Rhizomagastrodiae_C368-T10_good_111.720
SRR6049665Rhizomagastrodiae_C368-T10_good_111.720
SRP279888GastroGastrodia elata tuber 1.06
JuvenJuvenile tuber6.50
Mother_GastroMother tuber of Gastrodia elata 35.79
Mother_JuvenMother tuber of Juvenile 12.41