Detail information of GWHGAAEX016553/evm.TU.scaffold_77.80


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297621203|ref|YP_003709340.1|9.00E-31serine/threonine PP2C protein phosphatase [Waddlia chondrophila WSU 86-1044]
KOGKOG06981.00E-131Serine/threonine protein phosphatase
nrgi|743773072|ref|XP_010916865.1|8.53E-150PREDICTED: probable protein phosphatase 2C 41 isoform X1 [Elaeis guineensis]
Swissprottr|Q7XQU7|P2C41_ORYSJ2.00E-134Probable protein phosphatase 2C 41
trEMBLtr|E0CRK9|E0CRK9_VITVI2.00E-144Putative uncharacterized protein {ECO:0000313|EMBL:CBI19163.3}
TAIRAT1G347501.00E-131Protein phosphatase 2C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007530876693116612+
Transcript Sequence

Network for GWHGAAEX016553

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.20PP2C432742.40E-54
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms56.460
SRR2545915Juvenile tuber49.480
SRP108465SRR5643513five period of Gastrodia elata28.680
SRR5643514five period of Gastrodia elata27.270
SRR5643515five period of Gastrodia elata31.560
SRR5643524five period of Gastrodia elata23.050
SRR5643525five period of Gastrodia elata81.030
SRR5643528five period of Gastrodia elata92.160
SRR5643658five period of Gastrodia elata84.190
SRR5643659five period of Gastrodia elata33.660
SRR5643660five period of Gastrodia elata37.050
SRR5643661five period of Gastrodia elata36.840
SRR5643662five period of Gastrodia elata34.720
SRR5643663five period of Gastrodia elata27.570
SRR5643664five period of Gastrodia elata32.280
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.980
SRR6049655Rhizomagastrodiae_C368-T10_good_135.770
SRR6049656Rhizomagastrodiae_C368-T07_good_125.690
SRR6049657Rhizomagastrodiae_C368-T07_good_131.830
SRR6049658Rhizomagastrodiae_C368-T04_good_135.320
SRR6049659Rhizomagastrodiae_C368-T04_good_138.090
SRR6049660Rhizomagastrodiae_C368-T01_good_135.250
SRR6049661Rhizomagastrodiae_C368-T04_good_130.850
SRR6049662Rhizomagastrodiae_C368-T01_good_128.330
SRR6049663Rhizomagastrodiae_C368-T01_good_129.580
SRR6049664Rhizomagastrodiae_C368-T10_good_130.130
SRR6049665Rhizomagastrodiae_C368-T10_good_130.130
SRP279888GastroGastrodia elata tuber 33.75
JuvenJuvenile tuber26.87
Mother_GastroMother tuber of Gastrodia elata 29.95
Mother_JuvenMother tuber of Juvenile 33.71