Detail information of GWHGAAEX016557/evm.TU.scaffold_77.86


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672126285|ref|XP_008786588.1|9.06E-119PREDICTED: uncharacterized protein LOC103704887 isoform X7 [Phoenix dactylifera]
Swissprottr|Q9C7B1|TRP3_ARATH3.00E-07Telomere repeat-binding protein 3
trEMBLtr|F6HXY2|F6HXY2_VITVI4.00E-90Putative uncharacterized protein {ECO:0000313|EMBL:CCB59305.1}
TAIRAT1G726501.00E-63TRF-like 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007533371023357256-
Transcript Sequence

Network for GWHGAAEX016557

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13921.5Myb_DNA-bind_63353879.50E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms32.260
SRR2545915Juvenile tuber29.270
SRP108465SRR5643513five period of Gastrodia elata24.520
SRR5643514five period of Gastrodia elata23.060
SRR5643515five period of Gastrodia elata24.290
SRR5643524five period of Gastrodia elata25.370
SRR5643525five period of Gastrodia elata38.600
SRR5643528five period of Gastrodia elata36.210
SRR5643658five period of Gastrodia elata51.280
SRR5643659five period of Gastrodia elata21.280
SRR5643660five period of Gastrodia elata21.750
SRR5643661five period of Gastrodia elata22.560
SRR5643662five period of Gastrodia elata21.150
SRR5643663five period of Gastrodia elata21.490
SRR5643664five period of Gastrodia elata18.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.730
SRR6049655Rhizomagastrodiae_C368-T10_good_129.790
SRR6049656Rhizomagastrodiae_C368-T07_good_123.720
SRR6049657Rhizomagastrodiae_C368-T07_good_124.370
SRR6049658Rhizomagastrodiae_C368-T04_good_126.010
SRR6049659Rhizomagastrodiae_C368-T04_good_131.230
SRR6049660Rhizomagastrodiae_C368-T01_good_123.220
SRR6049661Rhizomagastrodiae_C368-T04_good_125.280
SRR6049662Rhizomagastrodiae_C368-T01_good_121.740
SRR6049663Rhizomagastrodiae_C368-T01_good_126.480
SRR6049664Rhizomagastrodiae_C368-T10_good_124.370
SRR6049665Rhizomagastrodiae_C368-T10_good_124.370
SRP279888GastroGastrodia elata tuber 24.81
JuvenJuvenile tuber15.10
Mother_GastroMother tuber of Gastrodia elata 25.34
Mother_JuvenMother tuber of Juvenile 12.18