Detail information of GWHGAAEX016559/evm.TU.scaffold_77.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|326404909|ref|YP_004284991.1|9.00E-20hypothetical protein ACMV_27620 [Acidiphilium multivorum AIU301]
KOGKOG26020Predicted cell surface protein homologous to bacterial outer membrane proteins
nrgi|743788152|ref|XP_010922594.1|0PREDICTED: SAM50-like protein SPAC17C9.06 [Elaeis guineensis]
trEMBLtr|M0SQ42|M0SQ42_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P18790_001}
TAIRAT5G055200Outer membrane OMP85 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007533758753405713-
Transcript Sequence

Network for GWHGAAEX016559

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07244.14POTRA691470.00019
PF01103.22Bac_surface_Ag1775221.00E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0019867Cellular Componentouter membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.070
SRR2545915Juvenile tuber15.470
SRP108465SRR5643513five period of Gastrodia elata18.300
SRR5643514five period of Gastrodia elata18.900
SRR5643515five period of Gastrodia elata16.450
SRR5643524five period of Gastrodia elata18.610
SRR5643525five period of Gastrodia elata15.390
SRR5643528five period of Gastrodia elata19.440
SRR5643658five period of Gastrodia elata13.490
SRR5643659five period of Gastrodia elata19.640
SRR5643660five period of Gastrodia elata20.320
SRR5643661five period of Gastrodia elata19.130
SRR5643662five period of Gastrodia elata20.180
SRR5643663five period of Gastrodia elata17.800
SRR5643664five period of Gastrodia elata16.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.230
SRR6049655Rhizomagastrodiae_C368-T10_good_117.320
SRR6049656Rhizomagastrodiae_C368-T07_good_121.380
SRR6049657Rhizomagastrodiae_C368-T07_good_113.480
SRR6049658Rhizomagastrodiae_C368-T04_good_115.830
SRR6049659Rhizomagastrodiae_C368-T04_good_113.970
SRR6049660Rhizomagastrodiae_C368-T01_good_116.260
SRR6049661Rhizomagastrodiae_C368-T04_good_115.110
SRR6049662Rhizomagastrodiae_C368-T01_good_125.590
SRR6049663Rhizomagastrodiae_C368-T01_good_124.610
SRR6049664Rhizomagastrodiae_C368-T10_good_126.700
SRR6049665Rhizomagastrodiae_C368-T10_good_126.700
SRP279888GastroGastrodia elata tuber 17.72
JuvenJuvenile tuber12.98
Mother_GastroMother tuber of Gastrodia elata 14.14
Mother_JuvenMother tuber of Juvenile 12.79