Gene detail

Detail information of GWHGAAEX016563/evm.TU.scaffold_77.95

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743817287\|ref\|XP_010930887.1\|	2.22E-136	PREDICTED: uncharacterized protein At4g26450-like [Elaeis guineensis]
Swissprot	tr\|P0CB21\|Y4645_ARATH	9.00E-14	Uncharacterized protein At4g26450
trEMBL	tr\|M0TUY1\|M0TUY1_MUSAM	7.00E-105	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P30290_001}
TAIR	AT4G26450	7.00E-13	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000075	3615725	3618903	+

Transcript Sequence
>GWHTAAEX016563 AATCCGATTGAATTGGCTCACCGCTCCTCAATATATGCGCTGATGCACTGATGCACTCTGAGCGCTCCGTCATCTAATACGTGAACTCGTTAAAGTTTGGGCGGAATTCTTCACTGATGAAAGTATGGGGTTCGGCAGATGGCATCTGCTCAGAGTCCGAGCAGCAGGATACCCTTTCCACCACTAATTTGGGTCCCAGATAACCTTTCCCTGTAAGCCCCAGTTCGTCCATCGTCATCGCCAAGGACAGCGGGAGGCGGTGGGGATTCGAAGGAGCTTAATTGAAGTGAAATTACGCAGGATGCAGTCTAGATATCGAAGCCCTAGGGACGGATTCCGAACCGGCCCTCCGGCGATCTCCGGCGGACGGATCTCTTCCTATGGCCGAGATCCCGACCGCGGTCCCCCAAATCCTCACCTTTTTCCTCGCAAGCTCGACATCCTCATGGAAGCTGGCCGTCTGGCCGCTGAGTACTTGGATTCGAGAGGCATCATCCTTCCAGAGCATCTCAGAAAAAAGTTCCCCAGCGGGAGCCCTCCTGGATTCGAGCCGCAGGCTAGAGAAATTCCGCCGCAATCGGAGGTCAGGACATCTGCATTGGCTCGGCTTGGCCAGAGATTTGATGATGAGGGGCGCTTTGATTCGAGGAGGCGGGAGAAGTTGAGGAAGAGGCACGGGCCTTATAGTAGAGTGTACGACTCTGATTGGGGCAGGGAGAATGGAAAGCATAGAAATTGGATGGACAGGGGAAGAGCATACTCCAATCTGGCGGACGAAGAGGAGGAAGAGTTTGCTCCCGGGTTTGGTAGAAATAGGAGAAAATGCTATTCTGAGATTAAGAGTAGCGTGTCTAGAGTTTGTGCGGATGACCAACCGACGAGGAGCGAGTCCGTTTCGGAGAAGGAGAATTTTGAATTTGCTGGTGATACTTTGTCCAAGGCAAGTTCATCCAGTATAAAGAAGGATCATCAGCCTGAGGCTGATGAGGATTCAAGCAAGGGTGCTGACGAAGCTAAGGTTTCATGCTCTGATTTCATGGAGGAGGTCAAGAGTGGAAAAGAAGATGAACCGGAGATGATAGAACCAATGGAGGAAGATATGGATAGCAATGTTTGTAAAGAGGAAAGTGATGCAGACCTGAAAAACTGCAGTGATCTTTTGAAGCTGTGTAGTTTTACAAAAGTGCCTACGAAGCCTCGATCATCACTAACAAATAGGAGTCCGAAGGTTCAATGTGATTTTGTTGCTGAGATGAGTAATGCGATTGATGATTCTGGTGATGAAAAGGTCAAGGAATTGAATTCTGAGGGCAGTGACAGCTTAGAAGCACAGACTCCCGATAACCACAGCCATGTATCTGATGAATCCTTAGGAGAAGCTGCAGACTCGCAACCTGAGTTATTTCAGAACCCTCTTGATTCCGCAAATTGTTCTGAACCATTGAATGAGAAATATGATACTGGCTTTGAACATGATATTGATGAGAGCAAAAACAAAGATATTTCATCCTCTTCTCTGGTGCATAACACGATTAAACACATTGAATCTACTCTTCATGATGGGGAAGATGCCCAGGATGATGAAATGGACCAAGAAAAAAGTGAAAAAGGTTTGGACACAACTGCATTTACTCCAAATGCTAAAAGAGAATCTATTGTAATGTTGGAAGAAGAGAGTCAGCATGACGCTTCTGCATCATTTAAAATATGTGATCTCAACCTCACAGGAAGTCCTGAGATGAGTGAGATTCCTGGGGGTCCTGCTAAGGATCATATCTCTTCTGCCCCTAATATTGAAATGAACAAAGCCGTTTCAGCAGACTTGAACATATCAATGAGAAAGGGTGCCAGTGCATTTAACAATACTCAAATTTCTGGACATATCAAAGTAATTCCTGTAATTGATCTTGAGGAGGACTCCCATGCAGATGACAATGCCCTTGATTCTTCTAAGCACAAGAATGATATTTCATATCCAAACCTTGAAACTGTCTTAAATCAGGCAACACATACAGTTGATCTTCCGAGTATTCAGGATGGTTATAGTCTTGAATTTCCTGAGTTTTTAGGAACTGATATGTCTGGTTGTCCATCTGCCCAAGGAGACCTCAATGATATGCAGCCTGAGATGGGTCTTCACGGTACCGAGGGTTATTCCAATGTAGATGACCACATTTATGTTTCTCTTGACGAATTGCCAATAGGTTTTATGGGGGTTTGGGACCAACCATCTCAAGATTATGGGAAGTTCTTTTGAGCCACAAATAGGTCATCAATATTGTGCATTCAATTGTCAGTTGCAAAGTTTCCATTAATATATTATATCTGGTTAAAGATACATTATGTAATCACAAGTAACTTCTTATTATAGAAGATGATATATTAGTCACATCTTCATTATTAATAAGCTGTTATGTTTTGTGGTAGGTATTGGCTTGATTTCTCAACTTGTTTGTCTTTTCTTACTAATAGTTTATTAAATTTGAGTCTTTGTTGTTTATTGTAAAATAAACTATGTAAATAGCTGCTTGATAGAAAATATCACAAAGACAAAATTTCATTGATCCTACTTTAACCATAGCTTG

Network for GWHGAAEX016563

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	81.990
SRP064423	SRR2545915	Juvenile tuber	72.190
SRP108465	SRR5643513	five period of Gastrodia elata	48.930
	SRR5643514	five period of Gastrodia elata	48.070
	SRR5643515	five period of Gastrodia elata	45.080
	SRR5643524	five period of Gastrodia elata	43.620
	SRR5643525	five period of Gastrodia elata	44.830
	SRR5643528	five period of Gastrodia elata	39.670
	SRR5643658	five period of Gastrodia elata	51.640
	SRR5643659	five period of Gastrodia elata	55.570
	SRR5643660	five period of Gastrodia elata	58.990
	SRR5643661	five period of Gastrodia elata	54.010
	SRR5643662	five period of Gastrodia elata	54.700
	SRR5643663	five period of Gastrodia elata	53.200
	SRR5643664	five period of Gastrodia elata	54.540
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	59.510
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	44.490
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	48.610
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	68.490
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	64.650
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	87.200
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	65.450
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	64.800
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	46.750
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	53.160
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	47.100
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	47.100
SRP279888	Gastro	Gastrodia elata tuber	60.71
	Juven	Juvenile tuber	90.29
	Mother_Gastro	Mother tuber of Gastrodia elata	44.31
	Mother_Juven	Mother tuber of Juvenile	64.47