Detail information of GWHGAAEX016567/evm.TU.scaffold_77.100


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|209964249|ref|YP_002297164.1|2.00E-13NADH dehydrogenase [Rhodospirillum centenum SW]
KOGKOG33822.00E-88NADH:ubiquinone oxidoreductase, B17.2 subunit
nrgi|743779162|ref|XP_010920046.1|9.04E-98PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Elaeis guineensis]
Swissprottr|Q9M9M9|NDUAC_ARATH7.00E-89Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
trEMBLtr|K4BJB2|K4BJB2_SOLLC2.00E-94Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc03g096940.2.1}
TAIRAT3G031002.00E-88NADH:ubiquinone oxidoreductase, 17.2kDa subunit

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007538482963870829+
Transcript Sequence

Network for GWHGAAEX016567

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05071.15NDUFA12491542.90E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11352NDUFA12 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0008137Molecular FunctionNADH dehydrogenase (ubiquinone) activity
GO:0009055Molecular Functionelectron carrier activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms78.560
SRR2545915Juvenile tuber94.510
SRP108465SRR5643513five period of Gastrodia elata58.350
SRR5643514five period of Gastrodia elata90.750
SRR5643515five period of Gastrodia elata68.790
SRR5643524five period of Gastrodia elata95.530
SRR5643525five period of Gastrodia elata73.370
SRR5643528five period of Gastrodia elata65.050
SRR5643658five period of Gastrodia elata60.960
SRR5643659five period of Gastrodia elata41.730
SRR5643660five period of Gastrodia elata38.180
SRR5643661five period of Gastrodia elata46.020
SRR5643662five period of Gastrodia elata40.260
SRR5643663five period of Gastrodia elata40.630
SRR5643664five period of Gastrodia elata37.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_156.510
SRR6049655Rhizomagastrodiae_C368-T10_good_165.130
SRR6049656Rhizomagastrodiae_C368-T07_good_170.040
SRR6049657Rhizomagastrodiae_C368-T07_good_142.680
SRR6049658Rhizomagastrodiae_C368-T04_good_148.360
SRR6049659Rhizomagastrodiae_C368-T04_good_140.300
SRR6049660Rhizomagastrodiae_C368-T01_good_143.140
SRR6049661Rhizomagastrodiae_C368-T04_good_149.740
SRR6049662Rhizomagastrodiae_C368-T01_good_163.910
SRR6049663Rhizomagastrodiae_C368-T01_good_163.940
SRR6049664Rhizomagastrodiae_C368-T10_good_194.370
SRR6049665Rhizomagastrodiae_C368-T10_good_194.370
SRP279888GastroGastrodia elata tuber 40.94
JuvenJuvenile tuber41.10
Mother_GastroMother tuber of Gastrodia elata 26.14
Mother_JuvenMother tuber of Juvenile 32.79