Gene detail

Detail information of GWHGAAEX016578/evm.TU.scaffold_77.119

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0242	0	Kinesin-like protein
nr	gi\|695009606\|ref\|XP_009391444.1\|	0	PREDICTED: kinesin heavy chain-like isoform X1 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q8S950\|NACK1_TOBAC	1.00E-78	Kinesin-like protein NACK1
trEMBL	tr\|D7TIB4\|D7TIB4_VITVI	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT5G06670	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000075	4459920	4584217	-

Transcript Sequence
>GWHTAAEX016578 GCAGGTAATGACGAAAAAGCTTATTCGGTAAAGTCTATATAGAAGCAGTTGCCGTTTGCCCGTGCTTTACTGAGATTCGCTGTGGACCCTTGCTGCTTGCTTATATGCTAACCAGATCTCTGAGTTAGAGCAAGCAATAAAAAGCCCAGGGAAAGTCGCCTTTTCGATACATCGAAAGAAAACATCGCTTCCAAGTCAAGAAAGCACAGCGGCAAACCCTAGGAATTCCTCGTGCAGTTAATCTGCAGTACTACTTGTCCGCACTTTACCCCACGATTTCCTAGGAATGCGGCTCCGATCTACTCCGATTGCACTGTCAATGGCGCGGAAAGTGTTCACACCGCACCTATGGAGACCGTTGCCGTTCTACTCAGCGGAGTGATCCGAGCTTGCAATGGCTTACAAAGCGTTCCCCGTGCATAAGAGATCCGTGGTGGTCCCATCGGCGACCAAAGGGGTTCACTCACCAACTTCATCGACGACATCCTCATCGAGGTTAGTGCCGGAGGCTGTTTTGGTCGATGGACAGAGCTCGCCTGTGTCATCTTCGATTAAGAGCAAGCCGCATTACTACTTGGAGAGCTCCTCGCTGAACACTGAGGTGCAGAAAGAGAATGTGACGGTCACGGTCCGCTTCCGTCCACTCAGTCCTCGGGAGATTCGCCAGGGGGAGGAGATTGCTTGGTATGCGGACGGGGATACTATTGTTAGGAGCGAAAATAATCCATCTGTTGCATACGCATATGATAGAGTTTTTGGACCTACAACTACGACCAGACATGTATATGATGTTGCAGCCCAACATATTGTCAGCGGGACAATGGAGGGCATAAATGGAACCATTTTTGCTTATGGAGTTACAAGTAGCGGAAAGACCCATTCAATGCATGGAGATCAAAGGTCTCCTGGTATTATACCATTGGCCGTGAAGGATGCATTTAGTATTATACAAGAGACACCAAACCGAGAGTTTCTCCTTCGTGTATCTTACTTGGAAATCTATAATGAGGTTGTTAATGACTTGTTAAACCCTGCTGGCCAAAATTTGAGGATAAGGGAGGACGTTCAGGGAACTTATGTTGAGGGTATCAAGGAAGAAGTGGTATTATCTCCTGCACATGCTCTTTCTCTTATAGCAGCCGGTGAAGAACATAGGCATGTGGGATCTACGAAATTCAACTTACTAAGCAGCAGAAGCCATACAATATTTACACTGACAATAGAAAGCACTCCCTGTGGAGACTATAATGAAGGTGAAGCAGTTAATCTTTCTCAGCTTAACCTCATTGATCTGGCTGGTTCAGAGAGCTCAAAAGCTGAAACTACAGGTTTAAGGAGGAAAGAGGGGGGCTACATCAATAAAAGTTTATTAACGCTTGGAACTGTTATATCAAAATTAACTGAGGGAAGACCTACTCATATTCCATACCGGGACTCTAAGTTGACTCGTATACTCCAATCATCCTTGAGTGGTCAGGGGCGTGTGTCTCTTATATGCACCGTTACCCCATCGTCAAGCAATGCAGAAGAAACACATAACACATTAAAATTTGCTCATCGTGCTAAATGCATTGAGATTTTAGCATCTCAGAACAAGATTATTGATGAAAAATCCTTGATAAAGAAATATCAAACAGAGATACGTTGTCTGAAGGATGAATTGGAACAAATGAAAAGGGGTATGCTCTCTGTTAATGCTCTAAAAGGCAATGAAGGAGATGACATAGTTCTGCTAAAGCAAAAGCAACTCGAAGACGGTCATGTGAAACTACAATCTCGGCTTGAGCAAGAAGAAGAGGCAAAAGCAGCTCTGCTGGGAAGGATTCAGAGACTAACAAAGCTAATTTTGGTTTCGACAAAGGCAACCAATTCTCCAAGATTCCCACAACGCCCTGTTCAACGAAGGAGACATTCCTTTGGTGAAGAAGAGCTGTCATACCTTCCATTTAGAAGACGAGATATGATATTGGATAATGAAAGTAGCAACTTATTTTACTCGTTTGAAGGATACGAAGAGGCTGAATGTCAATCAAAGGAAGAAAAAAATCATCGGAAGCCTGGACTCTTAAATTGGTTTAAGCTAAAGAGACGAGATAGTGTTGTTGCAAGCTCTGATGGTGATAAGTCTAGTGGCACCAAATCCCTTACTACACCTTCAACGCCGCAGGATGACTGTGCAAACCTTCCTTCAGAACCAGGAATTTCAAATTCTTTATTCTCTGAAAGTTCTATCAATGTTCTAGCAGATGCCTCAATCAACGGAAATCTTGCTTCTGAAAAAGTTTCACCCCATGAAACACTTCTGTCCAGCACAAAATCTATTAGTCTTGTTGATCTACTGAAGGAGCAGCTTAGAATATTATCTGGAGAGATTGCTTTCAGTTCAAGCATTCTTGAAAGACTCTCAGACGAGGCGGCAAGTAGCCCAAAGAATGAGCAGACTCGATTGGAGATGAGGAAGGTTAGTGAAGAGTTAAAGGTAAAGAGTCAGCAAATGGCTTCTTTGGAAAAGCACATTGCAGATTTGACTTCTGCTAATAAAAGCAGCCACGAAAAGTTGGATCTTTCACCGTCTTATGCTGCGCTTGTAGAACAACTAAATGAGAAGACCTTTGAACTGGAGGTGAAAACTGCAGATAATCGAGTGATCCAGGATCAGTTGCAGCAAAAGATATGCGAGTGTGAAGAGTTACAGGAGGTGGTCGCTTCACTGAGGAGGCAGCTGTCCGAAGCTCATGATATGAGAAATTTCTCTGTCTACAGTACGGAACATTATAGTTTTGATGAAAAGAGCCTCCACCTGGTCAGAAGAAATGAAAGCAAGCATGCTCATCCAGACATCGAAGATCTCAACCGCAGAGTGTCGGAACTAACGGAGGCCAACAGCCGGCTGGAAGCACAGAACCAGAGACTGGCTGAGGAAAGCCAATACGCGAAGGGCCTGGCTTCGGCCGCAGGCGTGGAGCTGAAGGCCTTGTCGGAAGAGGTCACAAAGCTGATGAGCCACAACGAGAGGCTCGCCAACGAATTGTCTCTTGTGAAGAATTCCTCCAACCGAAGCAGAGCAGCTGCCGCGAAAGCCGGCAGAGGGAACAGTCACGTCAAGCTCCTTCCCATGGAAAGAGAGCAGAGAGAGTCCTCTGAGCTGCGGAGAAGGCTGGAGGAGTCGAAGCAGAAGGAAGCCTTTCTGGAGAGTGAGCTCGCCAACATGTGGGTCCTCGTCACAAAGCTGAGGCAATCTCAAGTAGCAGCCCCGGTGGGCGGCGGTCATGATGATTTCTTGGAAGATAAATAAAAGTATTCTCGTTCTTTGTTTCTGTGCTTTTTAAAAACAGCATTGTGTTTGTTTAGTAGAGTTGAAGAGACTGTGGGCGGAGGAAGGCAGCTCTCTATCTGGTTGATGGTGATGAATGATTTCTAGACATACTTTTCTGAAGCCTTGCATCTAGCGTTCGGGGAGCCAAATTTGAATTTTTGTTTTGTAAAATTTGTAAGTAATGATGCGTCATGCAAGCTAAGGGGTTATTTGTGCATATCGTAAAAAACATTCTTTTTCATTTTTCTGATCAAGTTTTTAAATCTGCTAATACAACATCAAAATATCTTTTTTCTTGTTGTTAAAAGTAGGATCTTATT

Network for GWHGAAEX016578

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	80	393	1.90E-103

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0005524	Molecular Function	ATP binding
GO:0003777	Molecular Function	microtubule motor activity
GO:0008017	Molecular Function	microtubule binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.390
SRP064423	SRR2545915	Juvenile tuber	14.630
SRP108465	SRR5643513	five period of Gastrodia elata	15.070
	SRR5643514	five period of Gastrodia elata	17.330
	SRR5643515	five period of Gastrodia elata	13.890
	SRR5643524	five period of Gastrodia elata	18.900
	SRR5643525	five period of Gastrodia elata	16.470
	SRR5643528	five period of Gastrodia elata	14.750
	SRR5643658	five period of Gastrodia elata	19.520
	SRR5643659	five period of Gastrodia elata	11.200
	SRR5643660	five period of Gastrodia elata	10.380
	SRR5643661	five period of Gastrodia elata	12.040
	SRR5643662	five period of Gastrodia elata	15.120
	SRR5643663	five period of Gastrodia elata	11.110
	SRR5643664	five period of Gastrodia elata	13.580
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.540
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.400
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.650
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	11.700
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.470
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	9.120
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.770
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	13.380
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	18.390
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.610
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.690
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.690
SRP279888	Gastro	Gastrodia elata tuber	18.95
	Juven	Juvenile tuber	14.78
	Mother_Gastro	Mother tuber of Gastrodia elata	36.96
	Mother_Juven	Mother tuber of Juvenile	27.27