Detail information of GWHGAAEX016584/evm.TU.scaffold_78.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|182678724|ref|YP_001832870.1|3.00E-98electron transfer flavoprotein subunit alpha [Beijerinckia indica subsp. indica ATCC 9039]
KOGKOG39547.00E-162Electron transfer flavoprotein, alpha subunit
nrgi|672162056|ref|XP_008800859.1|0PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial isoform X1 [Phoenix dactylifera]
Swissprottr|Q9C6I6|ETFA_ARATH2.00E-162Electron transfer flavoprotein subunit alpha, mitochondrial (Precursor)
trEMBLtr|U5D9D7|U5D9D7_AMBTC3.00E-176Uncharacterized protein {ECO:0000313|EMBL:ERN17008.1}
TAIRAT1G509407.00E-162electron transfer flavoprotein alpha

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000867096297186-
Transcript Sequence

Network for GWHGAAEX016584

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01012.20ETF342115.20E-29
PF00766.18ETF_alpha2373193.00E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0050660Molecular Functionflavin adenine dinucleotide binding
GO:0009055Molecular Functionelectron carrier activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.730
SRR2545915Juvenile tuber25.370
SRP108465SRR5643513five period of Gastrodia elata23.610
SRR5643514five period of Gastrodia elata28.840
SRR5643515five period of Gastrodia elata24.010
SRR5643524five period of Gastrodia elata26.060
SRR5643525five period of Gastrodia elata14.960
SRR5643528five period of Gastrodia elata16.660
SRR5643658five period of Gastrodia elata12.440
SRR5643659five period of Gastrodia elata25.200
SRR5643660five period of Gastrodia elata32.000
SRR5643661five period of Gastrodia elata41.530
SRR5643662five period of Gastrodia elata26.350
SRR5643663five period of Gastrodia elata27.960
SRR5643664five period of Gastrodia elata29.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.140
SRR6049655Rhizomagastrodiae_C368-T10_good_144.000
SRR6049656Rhizomagastrodiae_C368-T07_good_125.270
SRR6049657Rhizomagastrodiae_C368-T07_good_124.660
SRR6049658Rhizomagastrodiae_C368-T04_good_122.530
SRR6049659Rhizomagastrodiae_C368-T04_good_122.180
SRR6049660Rhizomagastrodiae_C368-T01_good_122.800
SRR6049661Rhizomagastrodiae_C368-T04_good_123.670
SRR6049662Rhizomagastrodiae_C368-T01_good_127.220
SRR6049663Rhizomagastrodiae_C368-T01_good_122.000
SRR6049664Rhizomagastrodiae_C368-T10_good_135.350
SRR6049665Rhizomagastrodiae_C368-T10_good_135.350
SRP279888GastroGastrodia elata tuber 32.05
JuvenJuvenile tuber39.54
Mother_GastroMother tuber of Gastrodia elata 11.29
Mother_JuvenMother tuber of Juvenile 28.59