Detail information of GWHGAAEX016585/evm.TU.scaffold_78.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33201.00E-10540S ribosomal protein S7
nrgi|695065618|ref|XP_009421404.1|1.92E-119PREDICTED: 40S ribosomal protein S7-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9XET4|RS7_SECCE2.00E-11540S ribosomal protein S7
trEMBLtr|M0RHS8|M0RHS8_MUSAM7.00E-120Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P13020_001}
TAIRAT5G161301.00E-105Ribosomal protein S7e family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000086132378140203-
Transcript Sequence

Network for GWHGAAEX016585

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01251.17Ribosomal_S7e71877.10E-78
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02993RP-S7e, RPS7 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms75.200
SRR2545915Juvenile tuber85.940
SRP108465SRR5643513five period of Gastrodia elata77.770
SRR5643514five period of Gastrodia elata70.880
SRR5643515five period of Gastrodia elata64.290
SRR5643524five period of Gastrodia elata75.670
SRR5643525five period of Gastrodia elata49.430
SRR5643528five period of Gastrodia elata56.200
SRR5643658five period of Gastrodia elata38.010
SRR5643659five period of Gastrodia elata101.610
SRR5643660five period of Gastrodia elata101.630
SRR5643661five period of Gastrodia elata99.460
SRR5643662five period of Gastrodia elata85.820
SRR5643663five period of Gastrodia elata85.610
SRR5643664five period of Gastrodia elata65.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_199.090
SRR6049655Rhizomagastrodiae_C368-T10_good_1180.020
SRR6049656Rhizomagastrodiae_C368-T07_good_1117.410
SRR6049657Rhizomagastrodiae_C368-T07_good_183.160
SRR6049658Rhizomagastrodiae_C368-T04_good_178.940
SRR6049659Rhizomagastrodiae_C368-T04_good_169.330
SRR6049660Rhizomagastrodiae_C368-T01_good_192.910
SRR6049661Rhizomagastrodiae_C368-T04_good_191.290
SRR6049662Rhizomagastrodiae_C368-T01_good_1157.870
SRR6049663Rhizomagastrodiae_C368-T01_good_1133.030
SRR6049664Rhizomagastrodiae_C368-T10_good_1168.390
SRR6049665Rhizomagastrodiae_C368-T10_good_1168.390
SRP279888GastroGastrodia elata tuber 101.13
JuvenJuvenile tuber77.76
Mother_GastroMother tuber of Gastrodia elata 54.99
Mother_JuvenMother tuber of Juvenile 43.69