Detail information of GWHGAAEX016595/evm.TU.scaffold_78.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|156937517|ref|YP_001435313.1|4.00E-0750S ribosomal protein L24 [Ignicoccus hospitalis KIN4/I]
KOGKOG17223.00E-6860s ribosomal protein L24
nrgi|643717792|gb|KDP29235.1|1.92E-82hypothetical protein JCGZ_16624 [Jatropha curcas]
Swissprottr|Q9FUL4|RL24_PRUAV1.00E-7360S ribosomal protein L24
trEMBLtr|A0A067KAG6|A0A067KAG6_JATCU7.00E-83Uncharacterized protein {ECO:0000313|EMBL:KDP29235.1}
TAIRAT2G366203.00E-68ribosomal protein L24

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000086346945351289+
Transcript Sequence

Network for GWHGAAEX016595

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01246.19Ribosomal_L24e11741.30E-29
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02896RP-L24e, RPL24 Ribosome map03010

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms80.050
SRR2545915Juvenile tuber96.710
SRP108465SRR5643513five period of Gastrodia elata107.020
SRR5643514five period of Gastrodia elata115.690
SRR5643515five period of Gastrodia elata105.040
SRR5643524five period of Gastrodia elata117.630
SRR5643525five period of Gastrodia elata61.620
SRR5643528five period of Gastrodia elata94.840
SRR5643658five period of Gastrodia elata66.040
SRR5643659five period of Gastrodia elata99.750
SRR5643660five period of Gastrodia elata109.610
SRR5643661five period of Gastrodia elata124.020
SRR5643662five period of Gastrodia elata96.950
SRR5643663five period of Gastrodia elata92.130
SRR5643664five period of Gastrodia elata94.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_187.580
SRR6049655Rhizomagastrodiae_C368-T10_good_199.670
SRR6049656Rhizomagastrodiae_C368-T07_good_1112.430
SRR6049657Rhizomagastrodiae_C368-T07_good_171.550
SRR6049658Rhizomagastrodiae_C368-T04_good_192.570
SRR6049659Rhizomagastrodiae_C368-T04_good_167.220
SRR6049660Rhizomagastrodiae_C368-T01_good_193.620
SRR6049661Rhizomagastrodiae_C368-T04_good_184.090
SRR6049662Rhizomagastrodiae_C368-T01_good_1115.510
SRR6049663Rhizomagastrodiae_C368-T01_good_1103.020
SRR6049664Rhizomagastrodiae_C368-T10_good_1171.040
SRR6049665Rhizomagastrodiae_C368-T10_good_1171.040
SRP279888GastroGastrodia elata tuber 119.14
JuvenJuvenile tuber91.63
Mother_GastroMother tuber of Gastrodia elata 132.87
Mother_JuvenMother tuber of Juvenile 53.14