Detail information of GWHGAAEX016596/evm.TU.scaffold_78.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG18091.00E-32Vacuolar protein sorting-associated protein
nrgi|672185400|ref|XP_008812811.1|0PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103723626 [Phoenix dactylifera]
trEMBLtr|B8BAF9|B8BAF9_ORYSI0Putative uncharacterized protein {ECO:0000313|EMBL:EEC82816.1}
TAIRHS156190081.00E-32Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000086352021435804-
Transcript Sequence

Network for GWHGAAEX016596

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12624.6Chorein_N21152.20E-35
PF16908.4VPS131353671.20E-42
PF16910.4VPS13_mid_rpt5958181.70E-13
PF06650.11SHR-BD246427151.30E-27
PF16909.4VPS13_C301531854.90E-45
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms34.950
SRR2545915Juvenile tuber13.030
SRP108465SRR5643513five period of Gastrodia elata5.280
SRR5643514five period of Gastrodia elata6.340
SRR5643515five period of Gastrodia elata5.640
SRR5643524five period of Gastrodia elata6.070
SRR5643525five period of Gastrodia elata9.330
SRR5643528five period of Gastrodia elata6.830
SRR5643658five period of Gastrodia elata8.730
SRR5643659five period of Gastrodia elata5.930
SRR5643660five period of Gastrodia elata6.840
SRR5643661five period of Gastrodia elata6.210
SRR5643662five period of Gastrodia elata5.590
SRR5643663five period of Gastrodia elata6.090
SRR5643664five period of Gastrodia elata7.630
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.220
SRR6049655Rhizomagastrodiae_C368-T10_good_13.770
SRR6049656Rhizomagastrodiae_C368-T07_good_17.310
SRR6049657Rhizomagastrodiae_C368-T07_good_18.170
SRR6049658Rhizomagastrodiae_C368-T04_good_110.120
SRR6049659Rhizomagastrodiae_C368-T04_good_112.050
SRR6049660Rhizomagastrodiae_C368-T01_good_19.510
SRR6049661Rhizomagastrodiae_C368-T04_good_19.540
SRR6049662Rhizomagastrodiae_C368-T01_good_15.930
SRR6049663Rhizomagastrodiae_C368-T01_good_17.970
SRR6049664Rhizomagastrodiae_C368-T10_good_15.140
SRR6049665Rhizomagastrodiae_C368-T10_good_15.140
SRP279888GastroGastrodia elata tuber 11.82
JuvenJuvenile tuber12.00
Mother_GastroMother tuber of Gastrodia elata 8.75
Mother_JuvenMother tuber of Juvenile 12.02