Detail information of GWHGAAEX016617/evm.TU.scaffold_78.43


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743819351|ref|XP_010931497.1|5.18E-78PREDICTED: uncharacterized protein LOC105052398 [Elaeis guineensis]
Swissprottr|Q9ZVC9|FRS3_ARATH7.00E-13Protein FAR1-RELATED SEQUENCE 3
trEMBLtr|B9SY94|B9SY94_RICCO1.00E-63Putative uncharacterized protein {ECO:0000313|EMBL:EEF31435.1}
TAIRAT2G271102.00E-12FAR1-related sequence 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000086794951835280+
Transcript Sequence

Network for GWHGAAEX016617

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07258.13COMM_domain1932563.50E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.310
SRR2545915Juvenile tuber1.170
SRP108465SRR5643513five period of Gastrodia elata2.940
SRR5643514five period of Gastrodia elata5.630
SRR5643515five period of Gastrodia elata3.930
SRR5643524five period of Gastrodia elata4.340
SRR5643525five period of Gastrodia elata0.190
SRR5643528five period of Gastrodia elata0.320
SRR5643658five period of Gastrodia elata0.630
SRR5643659five period of Gastrodia elata1.880
SRR5643660five period of Gastrodia elata1.360
SRR5643661five period of Gastrodia elata2.320
SRR5643662five period of Gastrodia elata2.050
SRR5643663five period of Gastrodia elata2.610
SRR5643664five period of Gastrodia elata1.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.830
SRR6049655Rhizomagastrodiae_C368-T10_good_13.190
SRR6049656Rhizomagastrodiae_C368-T07_good_12.340
SRR6049657Rhizomagastrodiae_C368-T07_good_12.270
SRR6049658Rhizomagastrodiae_C368-T04_good_14.040
SRR6049659Rhizomagastrodiae_C368-T04_good_12.100
SRR6049660Rhizomagastrodiae_C368-T01_good_12.770
SRR6049661Rhizomagastrodiae_C368-T04_good_12.200
SRR6049662Rhizomagastrodiae_C368-T01_good_18.270
SRR6049663Rhizomagastrodiae_C368-T01_good_16.450
SRR6049664Rhizomagastrodiae_C368-T10_good_14.920
SRR6049665Rhizomagastrodiae_C368-T10_good_14.920
SRP279888GastroGastrodia elata tuber 1.23
JuvenJuvenile tuber10.28
Mother_GastroMother tuber of Gastrodia elata 2.56
Mother_JuvenMother tuber of Juvenile 2.88