Detail information of GWHGAAEX016624/evm.TU.scaffold_78.50
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|320102538|ref|YP_004178129.1| | 6.00E-18 | serine/threonine protein kinase [Isosphaera pallida ATCC 43644] |
| KOG | KOG0610 | 0 | Putative serine/threonine protein kinase |
| nr | gi|743859881|ref|XP_010942863.1| | 0 | PREDICTED: serine/threonine-protein kinase D6PK [Elaeis guineensis] |
| Swissprot | tr|Q39183|D6KL2_ARATH | 0 | Serine/threonine-protein kinase D6PKL2 |
| trEMBL | tr|K7LB98|K7LB98_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G01800.2} |
| TAIR | AT5G47750 | 0 | D6 protein kinase like 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000086 | 919168 | 923364 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016624
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 202 | 355 | 1.10E-37 |
| PF00069.24 | Pkinase | 434 | 538 | 2.10E-19 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | AGC_RSK-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 31.610 |
| SRR2545915 | Juvenile tuber | 30.790 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 38.650 |
| SRR5643514 | five period of Gastrodia elata | 39.070 | |
| SRR5643515 | five period of Gastrodia elata | 27.030 | |
| SRR5643524 | five period of Gastrodia elata | 36.440 | |
| SRR5643525 | five period of Gastrodia elata | 19.040 | |
| SRR5643528 | five period of Gastrodia elata | 17.750 | |
| SRR5643658 | five period of Gastrodia elata | 20.180 | |
| SRR5643659 | five period of Gastrodia elata | 31.110 | |
| SRR5643660 | five period of Gastrodia elata | 33.640 | |
| SRR5643661 | five period of Gastrodia elata | 24.850 | |
| SRR5643662 | five period of Gastrodia elata | 29.040 | |
| SRR5643663 | five period of Gastrodia elata | 29.830 | |
| SRR5643664 | five period of Gastrodia elata | 37.050 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 42.420 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 47.020 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 39.220 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 46.590 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 63.540 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 56.700 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 48.440 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 54.470 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 40.310 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 40.510 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 36.040 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 36.040 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 41.09 |
| Juven | Juvenile tuber | 60.80 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 42.02 | |
| Mother_Juven | Mother tuber of Juvenile | 40.83 |