Gene detail

Detail information of GWHGAAEX016626/evm.TU.scaffold_78.52

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743807290\|ref\|XP_010928058.1\|	2.10E-174	PREDICTED: uncharacterized protein LOC105049946 isoform X1 [Elaeis guineensis]
trEMBL	tr\|M0U9T9\|M0U9T9_MUSAM	3.00E-160	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_AchrUn_randomP16800_001}
TAIR	AT3G13225	5.00E-91	WW domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000086	934934	944217	+

Transcript Sequence
>GWHTAAEX016626 GCAGGGAATTCAGCATTTTTCTTATCATCGCTCGCCTTCGCTCGCCTTCGCTCCTTTGGAAACCCTAATATACCTAATATTCGTAGATTTCTGTAGCCGGAATCGCAGATCGATGGGCAAGCGAAAGGAGCGACGCCTCGCAGCTATGAGCGCTACAAATCGGAGAGTGAAGCTTGATCTCTTCGCGGAACCCTCCGAGGAGATGTGCAATTCTAGTAAGGAAGATGTTGGAGGGAATCAAGGACATGATCATTCTGCTAGTCCATCATCGTCAGGTCAAAATAAGGAGAATCCGCTGCTTTTACTAGGACAGTATAGTGATGATGAACTGGATGATGGAGCAAATAAGCAACAGAAAGAAGCTGATGATGCGGGCTATTCATCAGGGTCAGAAGACAAGGAAAAGGAGCTTGCAGATTTAAGCGAAGAATTAGAAGATAACAAGGAAGAAGTTGCTGAAGCCCACTCTTGTAAACCTAAGCCAGATCAAGCCGGCAGTTCTCAAGCATTGAAGGCCGATGGTACTGAACCTATTGAGAGTATTTCCATAGATGTTAATCTCTGTGAAACTGAGCTGGTGGCTCAAACTTGCGTATCTGAGCAAATTTCTGAGAATAATGAGAACGGTCACGTAAGAGAAAACTGGAAACTTGTGCTGCATGGGGAAAGTAATAATTACTATTACTGGAACACTGTGACTGGAGAGACCTCTTGGGAGGTGCCTCCTTCTCTGGCCATTGATCCTCAAAACAGAGACGAACAAGATGAATGTACTGCCATTGCAGGAAATGGTAATGTTACGGATTCAAGTGCAGATATGGGGATCTATGGGCACGTTCTTATTAGTACAGATGGACATGGAAGTAGCACTTTCATCTCCAAAGACACTGAGGAATTTGAAAACATGGAATTAAAAAGCAGAAAGGTTTCTGATGCTAGTACGACTGTAGAACAATATTGCACTAATAATGTTACTGCTCATAACAATTTGTCTGAGTATTCAACCATGGATGGACATTCGGGCTTACATCATCATGCATTGAATAATGAACAAAAGGATGTACAGAGCGATAATTATGTAGGTTCAGATGCCCATTCTTCTCAGCTGGTTCTACATGCTGAAGCGTTGCTGCGGAGGCTGGACATGTTGTTCAGTTCTGCGCAACTGGTTGAAGGATACGAAGGGATTAGAAAAGAGATTGATATCAGAATATCGGATTGCAGAGCACTTTCATCATATGGTTCAACATTGCTTCCGTTTTGGTGGCACACTGAAGTACAATTGAAGCAGATTGAATCCACAATTAACAAAAGCGAAGCATCCACAGTTTCTCGAAAGGAAGAATCCAGCAATTTGAATGTTATAGCAAAGTCTCTTCAAACAAGTTCATATACTGAAGTTACTGATGAAGACCAAAATATCATTGTTACTTCTGAAACAGGAACGAAGACTGAAGATACTAATAGTGAAAACCTTACTGTTCAAACTGAATTTCAACTTTTTCAAGGAAGTGAGCATCCTCTGGATGAGATTGTTCCTGAAGCCAACCCGAACCCTAATTCTTCAAATTATGTGCCTATTATAGTTGTTAATGCTGATGATGATATGGATGTTGAAATGGAGGTTGATGAAGAAATTCCTCTCCCAGCAGCAACATCTATGGCTATATGTCCAAGCCCTTCTGAACCGTCCCCTTCACTTTTTCCAAATGAATCACATATCTTACCTCCTCTAGAAGAGGAATGGATCCCACCGCCTCCTCCAGATGCTGAACCGCTTCCTCCCCCTCCCCCCCCTTCTGAGTTTGAGTTGGATTTCCCAAAAGAACCATCAGCCCCCTTTACTTCGTCCTACACCGAGACGATGCTCTACACTTTCCCAGATCAATATAGTGTTGGATATCATATTCCGACTTATGATTACTATTCTTCTACAGCAAATCAAGACCCTAATGGAGACTACTATGGTATTGCCAGCGGCCCTCAACTTACTGAATCAGAACCGTCAGCTTACTATGAACCCACAGCCCCAACTACATTGCCGGAAGCGTCTTCAAGCATCACCACAGTCGCATCCTCAGCATACTATGATGTTACAAATGTGCCCATTTCTTCTGCAAACTTGTTAAGCAGCACAGAGCCCTCTGTATTCTATGTGGAATCTAGTGCTGTTAATTATTATCAGGATGCAGCTCCTCCAGATTCTCTAAGCAGCTGCCAAGCAAGCACATTACAGTCTTCATCAGAAACTTACAGCAGCTTAGATACTCAGCTTGCCACTGCTCCCAAGAACAAATCAAAAGTTACACGCAGCAAGAAGCGTCCAGTTGCAGTTGCCCCTACTCTGAGGTTGAATAAGAAGGTTTCCAGTCTCGTTGATAAGTGGAAGGCTGCAAAAGAAGAGCTTCATGGAGAAGAACAGGAACTTGAGGATCCTCTCGAGATTCTTGAAAAGAAACGCCAGAAAGAGATAGAGGAATGGCGGGCCCGTCAGGTCGCAACTGGAGAAGCACAAGATAATGCTAATTTTGTTCCGTTGGGTGGTGATTGGCGAGAGCGAGTGAAACGCCGAGCCAGATCAAGATTGAATGATGATGCTGTAACATCAGCAGTGGCGGCCTCCGAGAGAGAGAAAAAGCAGCCCGATTTAGCCGAACTCTCCAATGATCTTCCTCCTCGATGGCAGGTTTACTGGGATGAATCGACAAAACAAGTCTATTATGGAAATCATACGACGTCAGAGACCACTTGGAACAGGCCGGCCAGATGACGATATTATTTCAGGAATTTCCAAATTGAACGCCCAACGAACCAGAGACTTAAATTGGCCGTGGATTAAACAAATTGGACGGCTGCGATTCACATTATTGTTGTGAGTGAGGTGGGATAAATCCGTGGGAAGTGGGAACACGCATCTATGTTAAGGCAATGCATTTTTATTTGTGTTAAGCGCTTTAATTATATTATTAAGTGTATTAACTTAATTAATTATATTAATTAATGATTAAATAGATATGTTATTTTTAATTATTCTGATAAATAATTTAATTAGATGTCATTTTTAATTATTCTGAGAG

Network for GWHGAAEX016626

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00397.25	WW	176	204	4.10E-06
PF00397.25	WW	853	883	1.60E-07

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	25.660
SRP064423	SRR2545915	Juvenile tuber	17.450
SRP108465	SRR5643513	five period of Gastrodia elata	15.280
	SRR5643514	five period of Gastrodia elata	14.990
	SRR5643515	five period of Gastrodia elata	15.010
	SRR5643524	five period of Gastrodia elata	15.310
	SRR5643525	five period of Gastrodia elata	18.230
	SRR5643528	five period of Gastrodia elata	15.130
	SRR5643658	five period of Gastrodia elata	15.770
	SRR5643659	five period of Gastrodia elata	17.760
	SRR5643660	five period of Gastrodia elata	19.510
	SRR5643661	five period of Gastrodia elata	17.380
	SRR5643662	five period of Gastrodia elata	20.550
	SRR5643663	five period of Gastrodia elata	20.690
	SRR5643664	five period of Gastrodia elata	18.270
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	17.720
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	21.570
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.270
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	18.750
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	18.460
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	18.320
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	17.570
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	15.980
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.580
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	15.280
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	17.030
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	17.030
SRP279888	Gastro	Gastrodia elata tuber	27.32
	Juven	Juvenile tuber	29.53
	Mother_Gastro	Mother tuber of Gastrodia elata	18.65
	Mother_Juven	Mother tuber of Juvenile	23.28