Detail information of GWHGAAEX016630/evm.TU.scaffold_78.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG48514.00E-15Uncharacterized conserved protein
nrgi|743865188|ref|XP_010904778.1|8.42E-30PREDICTED: thyroid transcription factor 1-associated protein 26-like isoform X2 [Elaeis guineensis]
trEMBLtr|I1IHU6|I1IHU6_BRADI5.00E-28Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI4G05720.2}
TAIRAT4G031804.00E-15Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000086985214994523+
Transcript Sequence

Network for GWHGAAEX016630

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08524.10rRNA_processing1893213.30E-10
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.300
SRR2545915Juvenile tuber22.940
SRP108465SRR5643513five period of Gastrodia elata17.220
SRR5643514five period of Gastrodia elata12.830
SRR5643515five period of Gastrodia elata12.140
SRR5643524five period of Gastrodia elata13.400
SRR5643525five period of Gastrodia elata8.450
SRR5643528five period of Gastrodia elata14.030
SRR5643658five period of Gastrodia elata14.640
SRR5643659five period of Gastrodia elata14.630
SRR5643660five period of Gastrodia elata17.060
SRR5643661five period of Gastrodia elata17.850
SRR5643662five period of Gastrodia elata13.150
SRR5643663five period of Gastrodia elata13.530
SRR5643664five period of Gastrodia elata15.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.060
SRR6049655Rhizomagastrodiae_C368-T10_good_18.170
SRR6049656Rhizomagastrodiae_C368-T07_good_18.260
SRR6049657Rhizomagastrodiae_C368-T07_good_110.020
SRR6049658Rhizomagastrodiae_C368-T04_good_15.490
SRR6049659Rhizomagastrodiae_C368-T04_good_16.160
SRR6049660Rhizomagastrodiae_C368-T01_good_18.370
SRR6049661Rhizomagastrodiae_C368-T04_good_15.540
SRR6049662Rhizomagastrodiae_C368-T01_good_15.590
SRR6049663Rhizomagastrodiae_C368-T01_good_15.500
SRR6049664Rhizomagastrodiae_C368-T10_good_17.850
SRR6049665Rhizomagastrodiae_C368-T10_good_17.850
SRP279888GastroGastrodia elata tuber 10.49
JuvenJuvenile tuber10.59
Mother_GastroMother tuber of Gastrodia elata 5.52
Mother_JuvenMother tuber of Juvenile 10.88