Detail information of GWHGAAEX016633/evm.TU.scaffold_78.61


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|357393107|ref|YP_004907948.1|6.00E-19hypothetical protein KSE_62270 [Kitasatospora setae KM-6054]
nrgi|695024600|ref|XP_009399521.1|0PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q6S7B0|TAF5_ARATH2.00E-08Transcription initiation factor TFIID subunit 5
trEMBLtr|W0M2F5|W0M2F5_NARTA0Putative WD-repeat protein {ECO:0000313|EMBL:AHG30904.1}
TAIRAT3G133400Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008610800011123861-
Transcript Sequence

Network for GWHGAAEX016633

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.31WD403113533.70E-05
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms134.610
SRR2545915Juvenile tuber119.840
SRP108465SRR5643513five period of Gastrodia elata73.120
SRR5643514five period of Gastrodia elata73.400
SRR5643515five period of Gastrodia elata64.400
SRR5643524five period of Gastrodia elata71.830
SRR5643525five period of Gastrodia elata105.870
SRR5643528five period of Gastrodia elata74.510
SRR5643658five period of Gastrodia elata89.760
SRR5643659five period of Gastrodia elata55.830
SRR5643660five period of Gastrodia elata61.970
SRR5643661five period of Gastrodia elata57.990
SRR5643662five period of Gastrodia elata56.640
SRR5643663five period of Gastrodia elata55.250
SRR5643664five period of Gastrodia elata60.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_174.100
SRR6049655Rhizomagastrodiae_C368-T10_good_173.970
SRR6049656Rhizomagastrodiae_C368-T07_good_162.530
SRR6049657Rhizomagastrodiae_C368-T07_good_179.600
SRR6049658Rhizomagastrodiae_C368-T04_good_174.960
SRR6049659Rhizomagastrodiae_C368-T04_good_188.800
SRR6049660Rhizomagastrodiae_C368-T01_good_173.190
SRR6049661Rhizomagastrodiae_C368-T04_good_178.050
SRR6049662Rhizomagastrodiae_C368-T01_good_161.270
SRR6049663Rhizomagastrodiae_C368-T01_good_160.570
SRR6049664Rhizomagastrodiae_C368-T10_good_170.370
SRR6049665Rhizomagastrodiae_C368-T10_good_170.370
SRP279888GastroGastrodia elata tuber 51.04
JuvenJuvenile tuber80.04
Mother_GastroMother tuber of Gastrodia elata 71.55
Mother_JuvenMother tuber of Juvenile 62.79