Gene detail

Detail information of GWHGAAEX016635/evm.TU.scaffold_78.62

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG2344	Exocyst component protein and related proteins
nr	gi\|743788352\|ref\|XP_010922642.1\|	PREDICTED: exocyst complex component EXO70B1 [Elaeis guineensis]
Swissprot	tr\|Q9FGH9\|E70B1_ARATH	Exocyst complex component EXO70B1
trEMBL	tr\|A0A087GBW9\|A0A087GBW9_ARAAL	Uncharacterized protein {ECO:0000313\|EMBL:KFK27371.1}
TAIR	AT5G58430	exocyst subunit exo70 family protein B1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000086	1153083	1155411	+

Transcript Sequence
>GWHTAAEX016635 TAGCAATAACTTCTTAATTTTTTCTGCTTATTTATATTTATATTTTTAATTTGTTTGGTAACTAATTTTTTTTTTTAATTTAACTCTTTTTAAAAATACTATAATTATTATTTGACATAATTAAAGTAAATTTTGAATATTGAAATATACAGCCGAAATTTTTTAAAGCACTCTTATTCTTACCAATCTGTCGCATCCGCGTCCAGCAGTCATTTCGTCTGCTCCTCTCTCCGGTCTCGCCTCGTCCGATGCCATCTGTCCGCTCCCACGAAACCCTAATCCCCATATGAGCCCAAACAATGGCCGAGAACGGCGATGAAAAGCTCATAGAAGCGGCACGCCACATCGCCAAAACCCTAGGCCGAACCGACACCATGGCCGACGACATCCTCCAAGTTTTCTCCAACTTCGACGATCGATTTTCCCGCGAAAACCTCGCCGACGGCGATCTTTCCGTCGGATCGATCTCCGGAGACCATCCTCCCCCCATCCACGCCCAGATTTCCCGCTTCCTCTCCTCCGATCGATCCATCTGGTCGGACTCCGCCCAGGCCTCCGCCTTCCTCGCCTCCATCGACGCCCTCATATCCGCCATGCCTGGCTTCGACGATAGCCCTCCCTTCCTCGAGCTCCTGCATCAATCCATGCTTCGTCTCGAGGATGAGTTCCGATCGCTCATCGACAACCCTTATGGCGCTTCCCCCTACGAACCGGTTCCGCCGCCAGGATTCGATTCCGACGGGGAGGACTCTGCCGGCGACGAGGAACAAATCCCAGTCGCCCCCCCTGCGATGGACTACGATTTCGTCATCGACGCCCTCCCTCCGGGCTCCGTTTCCGATCTTCACGAGATTGGAAAGCGGATGATCGCCGGAGGGTTCGGCCGAGAGTGCGCCCATGCCTACAGCCTTTCCCGTCGGGATTTTCTCGAAGAAAGCATTTCCCGGCTAGGGATCCGGTTTCGCCTTTCCGACGACGTGCAATCCTCGCCATGGACGGAGCTCGAGTACGAGATAAGGCGTTGGGTGAAAGGTGTGAAGGTCGCGTACCTAATACTCTTCCCGAGCGAGCGACGCCTCTGCCAACGCATCTTCGGCGTTTCCCCCATCTCCGAGCTCTCCTTGGCCGAGGCTTGTCGTGGCCCGGCAATCCAGCTTCTGAGATTCGGAGACGCGATCGCCTCCTCGAGCAGATCGCCAGAGAGGCTCTTCATGGTGGTTGACATGTACGAGGCCTTGCGCGATGTGATTCCAGAGCTCGATGCCCACTCGGCGTTCGTCTGCTCGGAGTCCGTCGCGCTTTGGAAGAAGCTGGGAGCGACGATCCGCGGTATTTTCACCGAGCTGGATAATTTGATCAGGCGAGATCCGGCGACAATGGCGGTTCCAGGCGGAGGGCTGCACCCCATCACCCGGTATGTGATGAATTACCTCCGCGCGGCCTGCGCGTCTAGGGAAACCCTCGAGGAAGCCATGGACGAGGACGGGATCGGGCTTGTGGAAATTCCTGATCGGCCGTCGTCGCCCCTCGCTGTTCAGATTGCGTGGATCATGGAAGTTCTGCAAGGGAATCTGGAATCTAAGGCCAAGATCTACCGCGACCCGGCCCTCAGCTGCATCTTTCTGATGAACAACGGGAGGTACATGATCCAGAAAGTTAGGGATAGCAGCGACTTGATCATTCTGATGGGGGAGGAGTGGATTCGACGGCAGGCGGCTAAGGAGCGACGGTGGAGCGCGGAGTACCAGAAGAGCACTTGGAGCAAGGTGACGGCCGTGATCAGAACCGACTTAGGCGGGGGAAAATTGCCGGAGGCAGCCGTGATGAGGGAGAGATTGAAGGTTTTCGACGTGTACTTCGAGGAGATTTGTAAGGAGCAGAGCGGATGGGTGGTTGCGGACGAGAGATTGAGGGCGGAGTTGAGGATCGCGGCCGCGGGAATTGTGATTCCGGCCTACCGGCGCTTTCTCGGTATTTATAGGGGAGCTTTGGAAGGGGGGAAGACCGGAGAGAGGAATGCTGTTAAGCATAGCGCCCAGGAGGTTGAGGCTCGGATTAACGAGCTGTACGTGGGCAGCGTCAGGCCTCCTCCTGAGGTTTGAAGAGGGAGTGAGGTTTTTTATGAAAAAGGGCTTGCTAAATTAACTAATTACATAGGCATAGTTTTTGATGTAATTTTATTTTATTTTTGTAAATTTAAAAAATGGTAAAACAAGATTTCGTATTTATTAGTTTTTTTTTGTGTATTTATGTTTATTATTCAATTTTAGGTGCTTAATTTGTATTTCTTACACCTCAAGTAAATTCATTTGGGGATTTTACATAAATA

Network for GWHGAAEX016635

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.14	Exo70	241	588	2.10E-94

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006887	Biological Process	exocytosis
GO:0000145	Cellular Component	exocyst

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	17.810
SRP064423	SRR2545915	Juvenile tuber	17.440
SRP108465	SRR5643513	five period of Gastrodia elata	27.320
	SRR5643514	five period of Gastrodia elata	24.390
	SRR5643515	five period of Gastrodia elata	22.970
	SRR5643524	five period of Gastrodia elata	23.100
	SRR5643525	five period of Gastrodia elata	38.190
	SRR5643528	five period of Gastrodia elata	28.480
	SRR5643658	five period of Gastrodia elata	34.930
	SRR5643659	five period of Gastrodia elata	28.540
	SRR5643660	five period of Gastrodia elata	32.560
	SRR5643661	five period of Gastrodia elata	33.220
	SRR5643662	five period of Gastrodia elata	35.220
	SRR5643663	five period of Gastrodia elata	30.120
	SRR5643664	five period of Gastrodia elata	33.410
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	27.570
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	31.040
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	25.970
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	24.930
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	25.480
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	19.440
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	20.100
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	19.860
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	22.810
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	25.190
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	31.490
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	31.490
SRP279888	Gastro	Gastrodia elata tuber	29.32
	Juven	Juvenile tuber	40.80
	Mother_Gastro	Mother tuber of Gastrodia elata	32.79
	Mother_Juven	Mother tuber of Juvenile	39.33